Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCS1Q01581 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.19■□□□□ 0.82
HMGCS1Q01581 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.19■□□□□ 0.82
HMGCS1Q01581 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCS1Q01581 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HMGCS1Q01581 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HMGCS1Q01581 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.19■□□□□ 0.82
HMGCS1Q01581 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCS1Q01581 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCS1Q01581 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCS1Q01581 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS1Q01581 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS1Q01581 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCS1Q01581 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS1Q01581 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS1Q01581 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCS1Q01581 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
HMGCS1Q01581 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS1Q01581 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS1Q01581 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS1Q01581 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.18■□□□□ 0.82
HMGCS1Q01581 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGCS1Q01581 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCS1Q01581 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS1Q01581 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HMGCS1Q01581 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS1Q01581 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCS1Q01581 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 AC142381.2-201ENST00000566120 298 ntBASIC20.17■□□□□ 0.82
HMGCS1Q01581 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.17■□□□□ 0.82
HMGCS1Q01581 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.17■□□□□ 0.82
HMGCS1Q01581 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HMGCS1Q01581 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS1Q01581 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCS1Q01581 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS1Q01581 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS1Q01581 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCS1Q01581 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS1Q01581 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.16■□□□□ 0.82
HMGCS1Q01581 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCS1Q01581 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.16■□□□□ 0.82
HMGCS1Q01581 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCS1Q01581 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS1Q01581 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCS1Q01581 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCS1Q01581 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS1Q01581 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCS1Q01581 AC012414.1-201ENST00000556676 535 ntBASIC20.15■□□□□ 0.82
HMGCS1Q01581 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS1Q01581 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HMGCS1Q01581 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS1Q01581 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HMGCS1Q01581 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS1Q01581 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS1Q01581 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS1Q01581 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HMGCS1Q01581 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
HMGCS1Q01581 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
HMGCS1Q01581 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
HMGCS1Q01581 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS1Q01581 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS1Q01581 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGCS1Q01581 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGCS1Q01581 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS1Q01581 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGCS1Q01581 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGCS1Q01581 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGCS1Q01581 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGCS1Q01581 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS1Q01581 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HMGCS1Q01581 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS1Q01581 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS1Q01581 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS1Q01581 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCS1Q01581 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCS1Q01581 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCS1Q01581 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCS1Q01581 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCS1Q01581 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCS1Q01581 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCS1Q01581 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HMGCS1Q01581 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCS1Q01581 AC073130.3-201ENST00000624389 2278 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms