Protein–RNA interactions for Protein: P78371

CCT2, T-complex protein 1 subunit beta, humanhuman

Known RBP Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2P78371 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CCT2P78371 KRT18P14-201ENST00000534205 1250 ntBASIC24.56■■□□□ 1.52
CCT2P78371 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCT2P78371 AL049796.1-201ENST00000565336 1766 ntBASIC24.56■■□□□ 1.52
CCT2P78371 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.56■■□□□ 1.52
CCT2P78371 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCT2P78371 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCT2P78371 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCT2P78371 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCT2P78371 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.55■■□□□ 1.52
CCT2P78371 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CCT2P78371 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCT2P78371 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCT2P78371 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCT2P78371 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.55■■□□□ 1.52
CCT2P78371 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.55■■□□□ 1.52
CCT2P78371 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.55■■□□□ 1.52
CCT2P78371 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.54■■□□□ 1.52
CCT2P78371 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.54■■□□□ 1.52
CCT2P78371 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCT2P78371 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CCT2P78371 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCT2P78371 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCT2P78371 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCT2P78371 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.54■■□□□ 1.52
CCT2P78371 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.54■■□□□ 1.52
CCT2P78371 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.54■■□□□ 1.52
CCT2P78371 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCT2P78371 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CCT2P78371 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.53■■□□□ 1.52
CCT2P78371 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCT2P78371 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CCT2P78371 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.53■■□□□ 1.52
CCT2P78371 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCT2P78371 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.53■■□□□ 1.52
CCT2P78371 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.53■■□□□ 1.52
CCT2P78371 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCT2P78371 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCT2P78371 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCT2P78371 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCT2P78371 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.52■■□□□ 1.52
CCT2P78371 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCT2P78371 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.52■■□□□ 1.52
CCT2P78371 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCT2P78371 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.52■■□□□ 1.52
CCT2P78371 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.52■■□□□ 1.52
CCT2P78371 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCT2P78371 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCT2P78371 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.52■■□□□ 1.52
CCT2P78371 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCT2P78371 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CCT2P78371 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCT2P78371 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
CCT2P78371 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CCT2P78371 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCT2P78371 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCT2P78371 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCT2P78371 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.51■■□□□ 1.51
CCT2P78371 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCT2P78371 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCT2P78371 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCT2P78371 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCT2P78371 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
CCT2P78371 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.5■■□□□ 1.51
CCT2P78371 AC104187.1-201ENST00000607510 612 ntBASIC24.5■■□□□ 1.51
CCT2P78371 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCT2P78371 AC004854.2-201ENST00000608450 1441 ntBASIC24.5■■□□□ 1.51
CCT2P78371 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.5■■□□□ 1.51
CCT2P78371 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCT2P78371 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.5■■□□□ 1.51
CCT2P78371 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCT2P78371 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCT2P78371 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CCT2P78371 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.49■■□□□ 1.51
CCT2P78371 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.49■■□□□ 1.51
CCT2P78371 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCT2P78371 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.49■■□□□ 1.51
CCT2P78371 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.49■■□□□ 1.51
CCT2P78371 DUX4L2-201ENST00000561772 1275 ntBASIC24.49■■□□□ 1.51
CCT2P78371 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCT2P78371 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.49■■□□□ 1.51
CCT2P78371 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.49■■□□□ 1.51
CCT2P78371 DUX4L6-201ENST00000626483 1275 ntBASIC24.49■■□□□ 1.51
CCT2P78371 DUX4L1-201ENST00000627662 1275 ntBASIC24.49■■□□□ 1.51
CCT2P78371 DUX4L8-201ENST00000629013 1275 ntBASIC24.49■■□□□ 1.51
CCT2P78371 DUX4L3-201ENST00000630187 1275 ntBASIC24.49■■□□□ 1.51
CCT2P78371 DUX4L7-201ENST00000630678 1275 ntBASIC24.49■■□□□ 1.51
CCT2P78371 DUX4L5-201ENST00000630834 1275 ntBASIC24.49■■□□□ 1.51
CCT2P78371 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCT2P78371 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CCT2P78371 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CCT2P78371 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
CCT2P78371 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCT2P78371 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCT2P78371 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCT2P78371 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCT2P78371 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCT2P78371 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCT2P78371 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCT2P78371 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms