Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S1P61966 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S1P61966 AC004911.1-201ENST00000416316 871 ntBASIC21.17■□□□□ 0.98
AP1S1P61966 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.17■□□□□ 0.98
AP1S1P61966 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.17■□□□□ 0.98
AP1S1P61966 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.17■□□□□ 0.98
AP1S1P61966 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.17■□□□□ 0.98
AP1S1P61966 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S1P61966 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.17■□□□□ 0.98
AP1S1P61966 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.17■□□□□ 0.98
AP1S1P61966 Z98882.1-201ENST00000622160 2253 ntBASIC21.17■□□□□ 0.98
AP1S1P61966 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S1P61966 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S1P61966 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S1P61966 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S1P61966 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S1P61966 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.16■□□□□ 0.98
AP1S1P61966 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.16■□□□□ 0.98
AP1S1P61966 AC011767.1-201ENST00000617410 1153 ntBASIC21.16■□□□□ 0.98
AP1S1P61966 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.16■□□□□ 0.98
AP1S1P61966 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.16■□□□□ 0.98
AP1S1P61966 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S1P61966 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S1P61966 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.16■□□□□ 0.98
AP1S1P61966 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S1P61966 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.15■□□□□ 0.98
AP1S1P61966 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S1P61966 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
AP1S1P61966 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S1P61966 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S1P61966 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S1P61966 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
AP1S1P61966 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S1P61966 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.15■□□□□ 0.98
AP1S1P61966 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.15■□□□□ 0.98
AP1S1P61966 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.15■□□□□ 0.98
AP1S1P61966 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
AP1S1P61966 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.15■□□□□ 0.98
AP1S1P61966 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S1P61966 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
AP1S1P61966 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S1P61966 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S1P61966 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP1S1P61966 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.14■□□□□ 0.98
AP1S1P61966 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
AP1S1P61966 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP1S1P61966 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.14■□□□□ 0.98
AP1S1P61966 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.14■□□□□ 0.98
AP1S1P61966 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.14■□□□□ 0.98
AP1S1P61966 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 AC010536.3-201ENST00000620306 533 ntBASIC21.14■□□□□ 0.97
AP1S1P61966 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.14■□□□□ 0.97
AP1S1P61966 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S1P61966 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S1P61966 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.13■□□□□ 0.97
AP1S1P61966 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.13■□□□□ 0.97
AP1S1P61966 AC245052.3-201ENST00000450182 901 ntBASIC21.13■□□□□ 0.97
AP1S1P61966 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S1P61966 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.13■□□□□ 0.97
AP1S1P61966 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.13■□□□□ 0.97
AP1S1P61966 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
AP1S1P61966 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
AP1S1P61966 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S1P61966 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S1P61966 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S1P61966 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S1P61966 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S1P61966 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.13■□□□□ 0.97
AP1S1P61966 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S1P61966 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
AP1S1P61966 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.12■□□□□ 0.97
AP1S1P61966 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP1S1P61966 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP1S1P61966 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP1S1P61966 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.12■□□□□ 0.97
AP1S1P61966 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.12■□□□□ 0.97
AP1S1P61966 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.12■□□□□ 0.97
AP1S1P61966 AC080038.1-201ENST00000611274 1154 ntBASIC21.12■□□□□ 0.97
AP1S1P61966 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP1S1P61966 AC243732.1-201ENST00000612648 864 ntBASIC21.12■□□□□ 0.97
AP1S1P61966 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.12■□□□□ 0.97
AP1S1P61966 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP1S1P61966 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP1S1P61966 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.12■□□□□ 0.97
AP1S1P61966 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
AP1S1P61966 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.11■□□□□ 0.97
AP1S1P61966 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
AP1S1P61966 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.11■□□□□ 0.97
AP1S1P61966 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP1S1P61966 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
AP1S1P61966 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP1S1P61966 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms