Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.98■□□□□ 0.31
SPCS3P61009 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SPCS3P61009 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.98■□□□□ 0.31
SPCS3P61009 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.98■□□□□ 0.31
SPCS3P61009 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SPCS3P61009 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.98■□□□□ 0.31
SPCS3P61009 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SPCS3P61009 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS3P61009 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS3P61009 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS3P61009 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS3P61009 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.97■□□□□ 0.31
SPCS3P61009 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SPCS3P61009 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS3P61009 AP005435.1-201ENST00000529293 1178 ntBASIC16.97■□□□□ 0.31
SPCS3P61009 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.97■□□□□ 0.31
SPCS3P61009 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.97■□□□□ 0.31
SPCS3P61009 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS3P61009 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SPCS3P61009 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS3P61009 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SPCS3P61009 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.97■□□□□ 0.31
SPCS3P61009 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS3P61009 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SPCS3P61009 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS3P61009 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SPCS3P61009 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SPCS3P61009 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SPCS3P61009 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.96■□□□□ 0.31
SPCS3P61009 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.96■□□□□ 0.31
SPCS3P61009 AL138724.1-201ENST00000606771 1088 ntBASIC16.96■□□□□ 0.31
SPCS3P61009 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SPCS3P61009 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SPCS3P61009 LETM1P2-201ENST00000597330 2178 ntBASIC16.96■□□□□ 0.31
SPCS3P61009 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS3P61009 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SPCS3P61009 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.95■□□□□ 0.3
SPCS3P61009 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.95■□□□□ 0.3
SPCS3P61009 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.95■□□□□ 0.3
SPCS3P61009 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.95■□□□□ 0.3
SPCS3P61009 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.95■□□□□ 0.3
SPCS3P61009 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS3P61009 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.95■□□□□ 0.3
SPCS3P61009 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS3P61009 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.94■□□□□ 0.3
SPCS3P61009 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.94■□□□□ 0.3
SPCS3P61009 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SPCS3P61009 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS3P61009 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SPCS3P61009 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS3P61009 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.94■□□□□ 0.3
SPCS3P61009 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.94■□□□□ 0.3
SPCS3P61009 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.94■□□□□ 0.3
SPCS3P61009 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.94■□□□□ 0.3
SPCS3P61009 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.94■□□□□ 0.3
SPCS3P61009 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS3P61009 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS3P61009 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS3P61009 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.94■□□□□ 0.3
SPCS3P61009 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.94■□□□□ 0.3
SPCS3P61009 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS3P61009 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS3P61009 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.93■□□□□ 0.3
SPCS3P61009 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
SPCS3P61009 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS3P61009 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SPCS3P61009 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SPCS3P61009 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS3P61009 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms