Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 ARP7YPR034W 1434 nt5.09□□□□□ -1.59
CAF120P53836 YDL012CYDL012C 324 nt5.09□□□□□ -1.59
CAF120P53836 YER067C-AYER067C-A 324 nt5.09□□□□□ -1.59
CAF120P53836 GRX4YER174C 735 nt5.09□□□□□ -1.59
CAF120P53836 YLL044WYLL044W 447 nt5.09□□□□□ -1.59
CAF120P53836 VPS63YLR261C 327 nt5.09□□□□□ -1.59
CAF120P53836 ZEO1YOL109W 342 nt5.09□□□□□ -1.59
CAF120P53836 HIS4YCL030C 2400 nt5.09□□□□□ -1.59
CAF120P53836 PSE1YMR308C 3270 nt5.09□□□□□ -1.59
CAF120P53836 KAR9YPL269W 1935 nt5.09□□□□□ -1.6
CAF120P53836 ATH1YPR026W 3636 nt5.09□□□□□ -1.6
CAF120P53836 TRE1YPL176C 2352 nt5.08□□□□□ -1.6
CAF120P53836 ARP5YNL059C 2268 nt5.08□□□□□ -1.6
CAF120P53836 SER33YIL074C 1410 nt5.08□□□□□ -1.6
CAF120P53836 PXA1YPL147W 2613 nt5.08□□□□□ -1.6
CAF120P53836 YDL185C-AYDL185C-A 228 nt5.08□□□□□ -1.6
CAF120P53836 YGL193CYGL193C 312 nt5.08□□□□□ -1.6
CAF120P53836 YGR153WYGR153W 654 nt5.08□□□□□ -1.6
CAF120P53836 YHL048C-AYHL048C-A 135 nt5.08□□□□□ -1.6
CAF120P53836 YBL083CYBL083C 426 nt5.08□□□□□ -1.6
CAF120P53836 YOR302WYOR302W 78 nt5.08□□□□□ -1.6
CAF120P53836 YOR331CYOR331C 558 nt5.08□□□□□ -1.6
CAF120P53836 YPR096CYPR096C 303 nt5.08□□□□□ -1.6
CAF120P53836 YCL022CYCL022C 516 nt5.08□□□□□ -1.6
CAF120P53836 KCC4YCL024W 3114 nt5.08□□□□□ -1.6
CAF120P53836 PMT4YJR143C 2289 nt5.08□□□□□ -1.6
CAF120P53836 SOF1YLL011W 1470 nt5.07□□□□□ -1.6
CAF120P53836 YHR182WYHR182W 2358 nt5.07□□□□□ -1.6
CAF120P53836 YDR090CYDR090C 933 nt5.07□□□□□ -1.6
CAF120P53836 SSY5YJL156C 2100 nt5.07□□□□□ -1.6
CAF120P53836 YAL037WYAL037W 804 nt5.07□□□□□ -1.6
CAF120P53836 YLR458WYLR458W 381 nt5.07□□□□□ -1.6
CAF120P53836 GPB1YOR371C 2694 nt5.07□□□□□ -1.6
CAF120P53836 TDA11YHR159W 1515 nt5.07□□□□□ -1.6
CAF120P53836 ECM32YER176W 3366 nt5.07□□□□□ -1.6
CAF120P53836 CUE3YGL110C 1875 nt5.07□□□□□ -1.6
CAF120P53836 ALE1YOR175C 1860 nt5.07□□□□□ -1.6
CAF120P53836 DAK1YML070W 1755 nt5.06□□□□□ -1.6
CAF120P53836 STP2YHR006W 1626 nt5.06□□□□□ -1.6
CAF120P53836 DSS1YMR287C 2910 nt5.06□□□□□ -1.6
CAF120P53836 YGL088WYGL088W 366 nt5.06□□□□□ -1.6
CAF120P53836 YGL149WYGL149W 306 nt5.06□□□□□ -1.6
CAF120P53836 RSM25YIL093C 795 nt5.06□□□□□ -1.6
CAF120P53836 TMA22YJR014W 597 nt5.06□□□□□ -1.6
CAF120P53836 YJR085CYJR085C 318 nt5.06□□□□□ -1.6
CAF120P53836 TRM112YNR046W 408 nt5.06□□□□□ -1.6
CAF120P53836 LEU1YGL009C 2340 nt5.06□□□□□ -1.6
CAF120P53836 SKM1YOL113W 1968 nt5.05□□□□□ -1.6
CAF120P53836 ATG20YDL113C 1923 nt5.05□□□□□ -1.6
CAF120P53836 SAF1YBR280C 1914 nt5.05□□□□□ -1.6
CAF120P53836 YEH2YLR020C 1617 nt5.05□□□□□ -1.6
CAF120P53836 ALG11YNL048W 1647 nt5.05□□□□□ -1.6
CAF120P53836 NOP6YDL213C 678 nt5.05□□□□□ -1.6
CAF120P53836 YDL247W-AYDL247W-A 75 nt5.05□□□□□ -1.6
CAF120P53836 YAL031W-AYAL031W-A 309 nt5.05□□□□□ -1.6
CAF120P53836 NRD1YNL251C 1728 nt5.05□□□□□ -1.6
CAF120P53836 SUL2YLR092W 2682 nt5.05□□□□□ -1.6
CAF120P53836 TYW1YPL207W 2433 nt5.05□□□□□ -1.6
CAF120P53836 SEC39YLR440C 2130 nt5.05□□□□□ -1.6
CAF120P53836 CDC5YMR001C 2118 nt5.05□□□□□ -1.6
CAF120P53836 YMR221CYMR221C 1515 nt5.04□□□□□ -1.6
CAF120P53836 TGL3YMR313C 1929 nt5.04□□□□□ -1.6
CAF120P53836 YCR050CYCR050C 309 nt5.04□□□□□ -1.6
CAF120P53836 SMX2YFL017W-A 234 nt5.04□□□□□ -1.6
CAF120P53836 YJL150WYJL150W 303 nt5.04□□□□□ -1.6
CAF120P53836 SDH2YLL041C 801 nt5.04□□□□□ -1.6
CAF120P53836 INO4YOL108C 456 nt5.04□□□□□ -1.6
CAF120P53836 GRE2YOL151W 1029 nt5.04□□□□□ -1.6
CAF120P53836 PRP39YML046W 1890 nt5.04□□□□□ -1.6
CAF120P53836 GLT1YDL171C 6438 nt5.04□□□□□ -1.6
CAF120P53836 IZH3YLR023C 1632 nt5.04□□□□□ -1.6
CAF120P53836 SPB4YFL002C 1821 nt5.04□□□□□ -1.6
CAF120P53836 FZO1YBR179C 2568 nt5.04□□□□□ -1.6
CAF120P53836 BNA4YBL098W 1383 nt5.04□□□□□ -1.6
CAF120P53836 RIM15YFL033C 5313 nt5.03□□□□□ -1.6
CAF120P53836 RPS14AYCR031C 414 nt5.03□□□□□ -1.6
CAF120P53836 YAR075WYAR075W 474 nt5.03□□□□□ -1.6
CAF120P53836 PAI3YMR174C 207 nt5.03□□□□□ -1.6
CAF120P53836 snR49snR49 165 nt5.03□□□□□ -1.6
CAF120P53836 SYG1YIL047C 2709 nt5.03□□□□□ -1.6
CAF120P53836 YOR1YGR281W 4434 nt5.02□□□□□ -1.61
CAF120P53836 SSA2YLL024C 1920 nt5.02□□□□□ -1.61
CAF120P53836 tW(UCA)QtW(UCA)Q 74 nt5.02□□□□□ -1.61
CAF120P53836 TEN1YLR010C 483 nt5.02□□□□□ -1.61
CAF120P53836 YNL057WYNL057W 333 nt5.02□□□□□ -1.61
CAF120P53836 DAD3YBR233W-A 285 nt5.02□□□□□ -1.61
CAF120P53836 STE20YHL007C 2820 nt5.02□□□□□ -1.61
CAF120P53836 GDB1YPR184W 4611 nt5.01□□□□□ -1.61
CAF120P53836 AHC2YCR082W 387 nt5.01□□□□□ -1.61
CAF120P53836 YDL211CYDL211C 1119 nt5.01□□□□□ -1.61
CAF120P53836 NTF2YER009W 378 nt5.01□□□□□ -1.61
CAF120P53836 YER088C-AYER088C-A 324 nt5.01□□□□□ -1.61
CAF120P53836 RIM9YMR063W 720 nt5.01□□□□□ -1.61
CAF120P53836 PPG1YNR032W 1107 nt5.01□□□□□ -1.61
CAF120P53836 YBL108WYBL108W 306 nt5.01□□□□□ -1.61
CAF120P53836 YOR034C-AYOR034C-A 243 nt5.01□□□□□ -1.61
CAF120P53836 PRM1YNL279W 1986 nt5.01□□□□□ -1.61
CAF120P53836 PPQ1YPL179W 1650 nt5.01□□□□□ -1.61
CAF120P53836 NUP116YMR047C 3342 nt5.01□□□□□ -1.61
CAF120P53836 BIT2YBR270C 1638 nt5.01□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms