Protein–RNA interactions for Protein: P41806

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, yeastyeast

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA21P41806 YAR075WYAR075W 474 nt1.59□□□□□ -2.15
VMA21P41806 TIM12YBR091C 330 nt1.59□□□□□ -2.15
VMA21P41806 APD1YBR151W 951 nt1.59□□□□□ -2.15
VMA21P41806 MSH4YFL003C 2637 nt1.59□□□□□ -2.16
VMA21P41806 MYO2YOR326W 4725 nt1.59□□□□□ -2.16
VMA21P41806 UBR2YLR024C 5619 nt1.58□□□□□ -2.16
VMA21P41806 UTP21YLR409C 2820 nt1.58□□□□□ -2.16
VMA21P41806 RGL1YPL066W 1440 nt1.58□□□□□ -2.16
VMA21P41806 CWH41YGL027C 2502 nt1.58□□□□□ -2.16
VMA21P41806 CBS2YDR197W 1170 nt1.58□□□□□ -2.16
VMA21P41806 YGL159WYGL159W 1113 nt1.58□□□□□ -2.16
VMA21P41806 MIG2YGL209W 1149 nt1.58□□□□□ -2.16
VMA21P41806 LSM8YJR022W 330 nt1.58□□□□□ -2.16
VMA21P41806 TFA2YKR062W 987 nt1.58□□□□□ -2.16
VMA21P41806 CDC123YLR215C 1083 nt1.58□□□□□ -2.16
VMA21P41806 PML39YML107C 1005 nt1.58□□□□□ -2.16
VMA21P41806 snR11snR11 258 nt1.58□□□□□ -2.16
VMA21P41806 MRP2YPR166C 348 nt1.58□□□□□ -2.16
VMA21P41806 SNU114YKL173W 3027 nt1.58□□□□□ -2.16
VMA21P41806 PEP1YBL017C 4740 nt1.57□□□□□ -2.16
VMA21P41806 YEL028WYEL028W 462 nt1.57□□□□□ -2.16
VMA21P41806 PRE1YER012W 597 nt1.57□□□□□ -2.16
VMA21P41806 SUP56tL(CAA)A 82 nt1.57□□□□□ -2.16
VMA21P41806 SUP53tL(CAA)C 82 nt1.57□□□□□ -2.16
VMA21P41806 tL(CAA)DtL(CAA)D 82 nt1.57□□□□□ -2.16
VMA21P41806 tL(CAA)G1tL(CAA)G1 82 nt1.57□□□□□ -2.16
VMA21P41806 SUP54tL(CAA)G2 82 nt1.57□□□□□ -2.16
VMA21P41806 tL(CAA)G3tL(CAA)G3 82 nt1.57□□□□□ -2.16
VMA21P41806 tL(CAA)KtL(CAA)K 82 nt1.57□□□□□ -2.16
VMA21P41806 tL(CAA)LtL(CAA)L 82 nt1.57□□□□□ -2.16
VMA21P41806 tL(CAA)MtL(CAA)M 82 nt1.57□□□□□ -2.16
VMA21P41806 tL(CAA)NtL(CAA)N 82 nt1.57□□□□□ -2.16
VMA21P41806 tT(UGU)HtT(UGU)H 72 nt1.57□□□□□ -2.16
VMA21P41806 CSE4YKL049C 690 nt1.57□□□□□ -2.16
VMA21P41806 YKR075CYKR075C 924 nt1.57□□□□□ -2.16
VMA21P41806 TIF34YMR146C 1044 nt1.57□□□□□ -2.16
VMA21P41806 YMR247W-AYMR247W-A 144 nt1.57□□□□□ -2.16
VMA21P41806 ATG34YOL083W 1239 nt1.57□□□□□ -2.16
VMA21P41806 TPT1YOL102C 693 nt1.57□□□□□ -2.16
VMA21P41806 ANT1YPR128C 987 nt1.57□□□□□ -2.16
VMA21P41806 CDC60YPL160W 3273 nt1.57□□□□□ -2.16
VMA21P41806 GIP3YPL137C 3831 nt1.56□□□□□ -2.16
VMA21P41806 YGR168CYGR168C 1131 nt1.56□□□□□ -2.16
VMA21P41806 IKI1YHR187W 930 nt1.56□□□□□ -2.16
VMA21P41806 YKR051WYKR051W 1257 nt1.56□□□□□ -2.16
VMA21P41806 LIP2YLR239C 987 nt1.56□□□□□ -2.16
VMA21P41806 RPS17AYML024W 411 nt1.56□□□□□ -2.16
VMA21P41806 YML094C-AYML094C-A 402 nt1.56□□□□□ -2.16
VMA21P41806 YMR306C-AYMR306C-A 390 nt1.56□□□□□ -2.16
VMA21P41806 FPR1YNL135C 345 nt1.56□□□□□ -2.16
VMA21P41806 YOR331CYOR331C 558 nt1.56□□□□□ -2.16
VMA21P41806 RSA1YPL193W 1146 nt1.56□□□□□ -2.16
VMA21P41806 SEN54YPL083C 1404 nt1.56□□□□□ -2.16
VMA21P41806 SCP160YJL080C 3669 nt1.55□□□□□ -2.16
VMA21P41806 RAV2YDR202C 1056 nt1.55□□□□□ -2.16
VMA21P41806 RSA3YLR221C 663 nt1.55□□□□□ -2.16
VMA21P41806 END3YNL084C 1050 nt1.55□□□□□ -2.16
VMA21P41806 YMR1YJR110W 2067 nt1.55□□□□□ -2.16
VMA21P41806 MYO4YAL029C 4416 nt1.55□□□□□ -2.16
VMA21P41806 PBI1YPL272C 1554 nt1.55□□□□□ -2.16
VMA21P41806 IRC10YOL015W 1761 nt1.54□□□□□ -2.16
VMA21P41806 21S_rRNA21S_rRNA 3296 nt1.54□□□□□ -2.16
VMA21P41806 RPL13AYDL082W 600 nt1.54□□□□□ -2.16
VMA21P41806 UBC13YDR092W 462 nt1.54□□□□□ -2.16
VMA21P41806 HMO1YDR174W 741 nt1.54□□□□□ -2.16
VMA21P41806 NOP19YGR251W 591 nt1.54□□□□□ -2.16
VMA21P41806 MRPL6YHR147C 645 nt1.54□□□□□ -2.16
VMA21P41806 GPI14YJR013W 1212 nt1.54□□□□□ -2.16
VMA21P41806 YLR154W-AYLR154W-A 186 nt1.54□□□□□ -2.16
VMA21P41806 UBC12YLR306W 567 nt1.54□□□□□ -2.16
VMA21P41806 YBL028CYBL028C 321 nt1.54□□□□□ -2.16
VMA21P41806 REG2YBR050C 1017 nt1.54□□□□□ -2.16
VMA21P41806 UTP6YDR449C 1323 nt1.54□□□□□ -2.16
VMA21P41806 AGE1YDR524C 1449 nt1.54□□□□□ -2.16
VMA21P41806 STN1YDR082W 1485 nt1.54□□□□□ -2.16
VMA21P41806 PEX5YDR244W 1839 nt1.54□□□□□ -2.16
VMA21P41806 SSQ1YLR369W 1974 nt1.54□□□□□ -2.16
VMA21P41806 MAK5YBR142W 2322 nt1.54□□□□□ -2.16
VMA21P41806 TWF1YGR080W 999 nt1.53□□□□□ -2.16
VMA21P41806 SNX4YJL036W 1272 nt1.53□□□□□ -2.16
VMA21P41806 SAW1YAL027W 786 nt1.53□□□□□ -2.16
VMA21P41806 LHS1YKL073W 2646 nt1.53□□□□□ -2.16
VMA21P41806 PSY1YKL076C 384 nt1.53□□□□□ -2.16
VMA21P41806 BMT2YBR141C 1014 nt1.53□□□□□ -2.16
VMA21P41806 INO80YGL150C 4470 nt1.53□□□□□ -2.16
VMA21P41806 DFG16YOR030W 1860 nt1.52□□□□□ -2.17
VMA21P41806 CTK1YKL139W 1587 nt1.52□□□□□ -2.17
VMA21P41806 PUS9YDL036C 1389 nt1.52□□□□□ -2.17
VMA21P41806 APC11YDL008W 498 nt1.52□□□□□ -2.17
VMA21P41806 RTN1YDR233C 888 nt1.52□□□□□ -2.17
VMA21P41806 MPO1YGL010W 525 nt1.52□□□□□ -2.17
VMA21P41806 VMA10YHR039C-A 345 nt1.52□□□□□ -2.17
VMA21P41806 OMA1YKR087C 1038 nt1.52□□□□□ -2.17
VMA21P41806 IRC21YMR073C 606 nt1.52□□□□□ -2.17
VMA21P41806 MED11YMR112C 396 nt1.52□□□□□ -2.17
VMA21P41806 SPS4YOR313C 1017 nt1.52□□□□□ -2.17
VMA21P41806 HOS4YIL112W 3252 nt1.51□□□□□ -2.17
VMA21P41806 YBR138CYBR138C 1575 nt1.51□□□□□ -2.17
VMA21P41806 HUL5YGL141W 2733 nt1.51□□□□□ -2.17
VMA21P41806 YDR098C-AYDR098C-A 1323 nt1.51□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 53.8 ms