Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 FUS2YMR232W 2034 nt3.3□□□□□ -1.88
NDE1P40215 TFB1YDR311W 1929 nt3.29□□□□□ -1.88
NDE1P40215 POM152YMR129W 4014 nt3.29□□□□□ -1.88
NDE1P40215 SLU7YDR088C 1149 nt3.29□□□□□ -1.88
NDE1P40215 CDC26YFR036W 375 nt3.29□□□□□ -1.88
NDE1P40215 IMP4YNL075W 873 nt3.29□□□□□ -1.88
NDE1P40215 RPL20BYOR312C 519 nt3.29□□□□□ -1.88
NDE1P40215 YNL193WYNL193W 1677 nt3.29□□□□□ -1.88
NDE1P40215 PUF6YDR496C 1971 nt3.29□□□□□ -1.88
NDE1P40215 JJJ2YJL162C 1752 nt3.28□□□□□ -1.88
NDE1P40215 ARO1YDR127W 4767 nt3.28□□□□□ -1.88
NDE1P40215 HLR1YDR528W 1272 nt3.28□□□□□ -1.88
NDE1P40215 COX23YHR116W 456 nt3.28□□□□□ -1.88
NDE1P40215 YKL069WYKL069W 543 nt3.28□□□□□ -1.88
NDE1P40215 RPL22AYLR061W 366 nt3.28□□□□□ -1.88
NDE1P40215 BTS1YPL069C 1008 nt3.28□□□□□ -1.88
NDE1P40215 MRPL40YPL173W 894 nt3.28□□□□□ -1.88
NDE1P40215 AKR1YDR264C 2295 nt3.27□□□□□ -1.89
NDE1P40215 CBS2YDR197W 1170 nt3.27□□□□□ -1.89
NDE1P40215 YDR381C-AYDR381C-A 345 nt3.27□□□□□ -1.89
NDE1P40215 FMP32YFL046W 624 nt3.27□□□□□ -1.89
NDE1P40215 ECO1YFR027W 846 nt3.27□□□□□ -1.89
NDE1P40215 YHR180WYHR180W 492 nt3.27□□□□□ -1.89
NDE1P40215 RPC25YKL144C 639 nt3.27□□□□□ -1.89
NDE1P40215 CDC123YLR215C 1083 nt3.27□□□□□ -1.89
NDE1P40215 YLR257WYLR257W 966 nt3.27□□□□□ -1.89
NDE1P40215 YPT6YLR262C 648 nt3.27□□□□□ -1.89
NDE1P40215 DYN3YMR299C 939 nt3.27□□□□□ -1.89
NDE1P40215 NUR1YDL089W 1455 nt3.27□□□□□ -1.89
NDE1P40215 SEN54YPL083C 1404 nt3.27□□□□□ -1.89
NDE1P40215 PSY2YNL201C 2577 nt3.26□□□□□ -1.89
NDE1P40215 IKI1YHR187W 930 nt3.26□□□□□ -1.89
NDE1P40215 YIL046W-AYIL046W-A 165 nt3.26□□□□□ -1.89
NDE1P40215 MCR1YKL150W 909 nt3.26□□□□□ -1.89
NDE1P40215 BOI1YBL085W 2943 nt3.26□□□□□ -1.89
NDE1P40215 ITC1YGL133W 3795 nt3.25□□□□□ -1.89
NDE1P40215 YPR1YDR368W 939 nt3.25□□□□□ -1.89
NDE1P40215 YIR036W-AYIR036W-A 402 nt3.25□□□□□ -1.89
NDE1P40215 ARC18YLR370C 537 nt3.25□□□□□ -1.89
NDE1P40215 RAD33YML011C 534 nt3.25□□□□□ -1.89
NDE1P40215 YBL068W-AYBL068W-A 237 nt3.25□□□□□ -1.89
NDE1P40215 MGE1YOR232W 687 nt3.25□□□□□ -1.89
NDE1P40215 RIM13YMR154C 2184 nt3.25□□□□□ -1.89
NDE1P40215 SLK19YOR195W 2466 nt3.25□□□□□ -1.89
NDE1P40215 BRE5YNR051C 1548 nt3.24□□□□□ -1.89
NDE1P40215 NUP60YAR002W 1620 nt3.24□□□□□ -1.89
NDE1P40215 YCR045W-AYCR045W-A 351 nt3.24□□□□□ -1.89
NDE1P40215 SLD5YDR489W 885 nt3.24□□□□□ -1.89
NDE1P40215 VMA8YEL051W 771 nt3.24□□□□□ -1.89
NDE1P40215 YKE2YLR200W 345 nt3.24□□□□□ -1.89
NDE1P40215 YMR122W-AYMR122W-A 255 nt3.24□□□□□ -1.89
NDE1P40215 INP1YMR204C 1263 nt3.24□□□□□ -1.89
NDE1P40215 RHO5YNL180C 996 nt3.24□□□□□ -1.89
NDE1P40215 NGL1YOL042W 1092 nt3.24□□□□□ -1.89
NDE1P40215 YOL057WYOL057W 2136 nt3.24□□□□□ -1.89
NDE1P40215 YOR277CYOR277C 309 nt3.24□□□□□ -1.89
NDE1P40215 Q0255Q0255 1419 nt3.24□□□□□ -1.89
NDE1P40215 NSA1YGL111W 1392 nt3.24□□□□□ -1.89
NDE1P40215 BIT61YJL058C 1632 nt3.23□□□□□ -1.89
NDE1P40215 SNT1YCR033W 3681 nt3.23□□□□□ -1.89
NDE1P40215 FAP7YDL166C 594 nt3.23□□□□□ -1.89
NDE1P40215 RSR1YGR152C 819 nt3.23□□□□□ -1.89
NDE1P40215 YGR160WYGR160W 612 nt3.23□□□□□ -1.89
NDE1P40215 MVB12YGR206W 306 nt3.23□□□□□ -1.89
NDE1P40215 SFT1YKL006C-A 294 nt3.23□□□□□ -1.89
NDE1P40215 SMD2YLR275W 333 nt3.23□□□□□ -1.89
NDE1P40215 REC102YLR329W 795 nt3.23□□□□□ -1.89
NDE1P40215 ASI3YNL008C 2031 nt3.23□□□□□ -1.89
NDE1P40215 THI80YOR143C 960 nt3.23□□□□□ -1.89
NDE1P40215 RXT2YBR095C 1293 nt3.23□□□□□ -1.89
NDE1P40215 MBA1YBR185C 837 nt3.23□□□□□ -1.89
NDE1P40215 SHQ1YIL104C 1524 nt3.23□□□□□ -1.89
NDE1P40215 RGR1YLR071C 3249 nt3.23□□□□□ -1.89
NDE1P40215 SRB4YER022W 2064 nt3.23□□□□□ -1.89
NDE1P40215 ARK1YNL020C 1917 nt3.23□□□□□ -1.89
NDE1P40215 MET5YJR137C 4329 nt3.22□□□□□ -1.89
NDE1P40215 APC11YDL008W 498 nt3.22□□□□□ -1.89
NDE1P40215 YER046W-AYER046W-A 330 nt3.22□□□□□ -1.89
NDE1P40215 YHL044WYHL044W 708 nt3.22□□□□□ -1.89
NDE1P40215 YMR181CYMR181C 465 nt3.22□□□□□ -1.89
NDE1P40215 RPL20AYMR242C 519 nt3.22□□□□□ -1.89
NDE1P40215 SPR2YOR214C 711 nt3.22□□□□□ -1.89
NDE1P40215 CIN2YPL241C 807 nt3.22□□□□□ -1.89
NDE1P40215 RRP15YPR143W 753 nt3.22□□□□□ -1.89
NDE1P40215 snR24snR24 89 nt3.22□□□□□ -1.89
NDE1P40215 NOP12YOL041C 1380 nt3.22□□□□□ -1.89
NDE1P40215 MET6YER091C 2304 nt3.21□□□□□ -1.89
NDE1P40215 CDC37YDR168W 1521 nt3.21□□□□□ -1.9
NDE1P40215 RAV2YDR202C 1056 nt3.21□□□□□ -1.9
NDE1P40215 YDR442WYDR442W 393 nt3.21□□□□□ -1.9
NDE1P40215 tK(UUU)DtK(UUU)D 73 nt3.21□□□□□ -1.9
NDE1P40215 tK(UUU)G1tK(UUU)G1 73 nt3.21□□□□□ -1.9
NDE1P40215 tK(UUU)G2tK(UUU)G2 73 nt3.21□□□□□ -1.9
NDE1P40215 tK(UUU)KtK(UUU)K 73 nt3.21□□□□□ -1.9
NDE1P40215 tK(UUU)LtK(UUU)L 73 nt3.21□□□□□ -1.9
NDE1P40215 tK(UUU)OtK(UUU)O 73 nt3.21□□□□□ -1.9
NDE1P40215 tK(UUU)PtK(UUU)P 73 nt3.21□□□□□ -1.9
NDE1P40215 USE1YGL098W 738 nt3.21□□□□□ -1.9
NDE1P40215 TCD1YHR003C 1290 nt3.21□□□□□ -1.9
NDE1P40215 TPK3YKL166C 1197 nt3.21□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 44.3 ms