Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.78■■□□□ 1.88
COL15A1P39059 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL15A1P39059 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
COL15A1P39059 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL15A1P39059 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.77■■□□□ 1.88
COL15A1P39059 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL15A1P39059 AC026366.1-201ENST00000488803 879 ntBASIC26.77■■□□□ 1.88
COL15A1P39059 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.77■■□□□ 1.88
COL15A1P39059 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.77■■□□□ 1.88
COL15A1P39059 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.77■■□□□ 1.88
COL15A1P39059 AP006294.2-201ENST00000641667 209 ntBASIC26.77■■□□□ 1.88
COL15A1P39059 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COL15A1P39059 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
COL15A1P39059 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL15A1P39059 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
COL15A1P39059 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
COL15A1P39059 AP003097.1-201ENST00000530657 1135 ntBASIC26.76■■□□□ 1.87
COL15A1P39059 AC142381.4-202ENST00000563973 229 ntBASIC26.76■■□□□ 1.87
COL15A1P39059 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.76■■□□□ 1.87
COL15A1P39059 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL15A1P39059 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COL15A1P39059 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.76■■□□□ 1.87
COL15A1P39059 KRT17P1-201ENST00000399211 1546 ntBASIC26.75■■□□□ 1.87
COL15A1P39059 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
COL15A1P39059 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.75■■□□□ 1.87
COL15A1P39059 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL15A1P39059 AC068473.5-201ENST00000616428 2072 ntBASIC26.75■■□□□ 1.87
COL15A1P39059 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL15A1P39059 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL15A1P39059 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL15A1P39059 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL15A1P39059 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL15A1P39059 AC003102.1-202ENST00000563394 1796 ntBASIC26.74■■□□□ 1.87
COL15A1P39059 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.74■■□□□ 1.87
COL15A1P39059 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.74■■□□□ 1.87
COL15A1P39059 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.74■■□□□ 1.87
COL15A1P39059 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL15A1P39059 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
COL15A1P39059 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL15A1P39059 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL15A1P39059 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.74■■□□□ 1.87
COL15A1P39059 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.74■■□□□ 1.87
COL15A1P39059 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL15A1P39059 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
COL15A1P39059 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.73■■□□□ 1.87
COL15A1P39059 AC073648.6-201ENST00000641589 218 ntBASIC26.73■■□□□ 1.87
COL15A1P39059 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.73■■□□□ 1.87
COL15A1P39059 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
COL15A1P39059 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL15A1P39059 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.73■■□□□ 1.87
COL15A1P39059 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
COL15A1P39059 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL15A1P39059 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
COL15A1P39059 LSM12P1-201ENST00000411836 588 ntBASIC26.72■■□□□ 1.87
COL15A1P39059 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.72■■□□□ 1.87
COL15A1P39059 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.72■■□□□ 1.87
COL15A1P39059 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL15A1P39059 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.72■■□□□ 1.87
COL15A1P39059 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL15A1P39059 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL15A1P39059 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
COL15A1P39059 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.72■■□□□ 1.87
COL15A1P39059 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.72■■□□□ 1.87
COL15A1P39059 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL15A1P39059 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL15A1P39059 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL15A1P39059 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.72■■□□□ 1.87
COL15A1P39059 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL15A1P39059 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL15A1P39059 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL15A1P39059 AL355472.2-201ENST00000422958 438 ntBASIC26.71■■□□□ 1.87
COL15A1P39059 AL596275.1-201ENST00000423464 877 ntBASIC26.71■■□□□ 1.87
COL15A1P39059 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.71■■□□□ 1.87
COL15A1P39059 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.71■■□□□ 1.87
COL15A1P39059 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL15A1P39059 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL15A1P39059 AC092053.2-201ENST00000640557 1818 ntBASIC26.71■■□□□ 1.87
COL15A1P39059 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.71■■□□□ 1.87
COL15A1P39059 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
COL15A1P39059 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL15A1P39059 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL15A1P39059 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL15A1P39059 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL15A1P39059 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL15A1P39059 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL15A1P39059 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
COL15A1P39059 AC091799.1-201ENST00000422823 811 ntBASIC26.71■■□□□ 1.87
COL15A1P39059 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.71■■□□□ 1.87
COL15A1P39059 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
COL15A1P39059 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.7■■□□□ 1.87
COL15A1P39059 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL15A1P39059 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.7■■□□□ 1.86
COL15A1P39059 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
COL15A1P39059 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL15A1P39059 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
COL15A1P39059 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
COL15A1P39059 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.7■■□□□ 1.86
COL15A1P39059 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.7■■□□□ 1.86
COL15A1P39059 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
COL15A1P39059 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.7■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms