Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 MEI4YER044C-A 1227 nt2.63□□□□□ -1.99
TDA11P38854 YFR032C-BYFR032C-B 264 nt2.63□□□□□ -1.99
TDA11P38854 BAT1YHR208W 1182 nt2.63□□□□□ -1.99
TDA11P38854 NDL1YLR254C 570 nt2.63□□□□□ -1.99
TDA11P38854 YNL043CYNL043C 321 nt2.63□□□□□ -1.99
TDA11P38854 YNL203CYNL203C 612 nt2.63□□□□□ -1.99
TDA11P38854 YKL222CYKL222C 2118 nt2.63□□□□□ -1.99
TDA11P38854 YIL080WYIL080W 4722 nt2.63□□□□□ -1.99
TDA11P38854 RSE1YML049C 4086 nt2.63□□□□□ -1.99
TDA11P38854 AVT5YBL089W 1380 nt2.62□□□□□ -1.99
TDA11P38854 GPI14YJR013W 1212 nt2.62□□□□□ -1.99
TDA11P38854 JIP3YLR331C 378 nt2.62□□□□□ -1.99
TDA11P38854 RPL6BYLR448W 531 nt2.62□□□□□ -1.99
TDA11P38854 TFB6YOR352W 1032 nt2.62□□□□□ -1.99
TDA11P38854 AFT2YPL202C 1251 nt2.62□□□□□ -1.99
TDA11P38854 SWD3YBR175W 948 nt2.62□□□□□ -1.99
TDA11P38854 YBR201C-AYBR201C-A 204 nt2.62□□□□□ -1.99
TDA11P38854 MMS1YPR164W 4224 nt2.62□□□□□ -1.99
TDA11P38854 STN1YDR082W 1485 nt2.62□□□□□ -1.99
TDA11P38854 CWH41YGL027C 2502 nt2.62□□□□□ -1.99
TDA11P38854 PEX5YDR244W 1839 nt2.61□□□□□ -1.99
TDA11P38854 YDR124WYDR124W 975 nt2.61□□□□□ -1.99
TDA11P38854 YPR1YDR368W 939 nt2.61□□□□□ -1.99
TDA11P38854 VMA6YLR447C 1038 nt2.61□□□□□ -1.99
TDA11P38854 RPL23AYBL087C 414 nt2.61□□□□□ -1.99
TDA11P38854 GRX7YBR014C 612 nt2.61□□□□□ -1.99
TDA11P38854 RPN8YOR261C 1017 nt2.61□□□□□ -1.99
TDA11P38854 RRG7YOR305W 729 nt2.61□□□□□ -1.99
TDA11P38854 RIX1YHR197W 2292 nt2.61□□□□□ -1.99
TDA11P38854 SUL1YBR294W 2580 nt2.6□□□□□ -1.99
TDA11P38854 PSK1YAL017W 4071 nt2.6□□□□□ -1.99
TDA11P38854 PLP1YDR183W 693 nt2.6□□□□□ -1.99
TDA11P38854 LSM4YER112W 564 nt2.6□□□□□ -1.99
TDA11P38854 YIL046W-AYIL046W-A 165 nt2.6□□□□□ -1.99
TDA11P38854 ARG3YJL088W 1017 nt2.6□□□□□ -1.99
TDA11P38854 SMA2YML066C 1110 nt2.6□□□□□ -1.99
TDA11P38854 MIC27YNL100W 705 nt2.6□□□□□ -1.99
TDA11P38854 FMP41YNL168C 780 nt2.6□□□□□ -1.99
TDA11P38854 RRP14YKL082C 1305 nt2.6□□□□□ -1.99
TDA11P38854 AVT2YEL064C 1443 nt2.59□□□□□ -1.99
TDA11P38854 AI3Q0060 1248 nt2.59□□□□□ -1.99
TDA11P38854 HLR1YDR528W 1272 nt2.59□□□□□ -1.99
TDA11P38854 HYP2YEL034W 474 nt2.59□□□□□ -1.99
TDA11P38854 YHR182C-AYHR182C-A 474 nt2.59□□□□□ -1.99
TDA11P38854 YAL031W-AYAL031W-A 309 nt2.59□□□□□ -1.99
TDA11P38854 NNF1YJR112W 606 nt2.59□□□□□ -1.99
TDA11P38854 BAG7YOR134W 1230 nt2.59□□□□□ -1.99
TDA11P38854 YPR027CYPR027C 834 nt2.59□□□□□ -1.99
TDA11P38854 AIM4YBR194W 372 nt2.59□□□□□ -1.99
TDA11P38854 MPS1YDL028C 2295 nt2.59□□□□□ -1.99
TDA11P38854 YKL100CYKL100C 1764 nt2.59□□□□□ -2
TDA11P38854 RGR1YLR071C 3249 nt2.59□□□□□ -2
TDA11P38854 SKO1YNL167C 1944 nt2.58□□□□□ -2
TDA11P38854 ICR1ICR1 3199 nt2.58□□□□□ -2
TDA11P38854 FRE8YLR047C 2061 nt2.58□□□□□ -2
TDA11P38854 RPL13AYDL082W 600 nt2.58□□□□□ -2
TDA11P38854 SEM1YDR363W-A 270 nt2.58□□□□□ -2
TDA11P38854 YEL057CYEL057C 702 nt2.58□□□□□ -2
TDA11P38854 RGI1YER067W 486 nt2.58□□□□□ -2
TDA11P38854 DAD2YKR083C 402 nt2.58□□□□□ -2
TDA11P38854 SRL3YKR091W 741 nt2.58□□□□□ -2
TDA11P38854 BOS1YLR078C 735 nt2.58□□□□□ -2
TDA11P38854 SAM37YMR060C 984 nt2.58□□□□□ -2
TDA11P38854 TSR4YOL022C 1227 nt2.58□□□□□ -2
TDA11P38854 POL3YDL102W 3294 nt2.58□□□□□ -2
TDA11P38854 GCD2YGR083C 1956 nt2.58□□□□□ -2
TDA11P38854 SPF1YEL031W 3648 nt2.57□□□□□ -2
TDA11P38854 NAB3YPL190C 2409 nt2.57□□□□□ -2
TDA11P38854 EAP1YKL204W 1899 nt2.57□□□□□ -2
TDA11P38854 YCR016WYCR016W 873 nt2.57□□□□□ -2
TDA11P38854 YFL015CYFL015C 495 nt2.57□□□□□ -2
TDA11P38854 YGR168CYGR168C 1131 nt2.57□□□□□ -2
TDA11P38854 YKL131WYKL131W 522 nt2.57□□□□□ -2
TDA11P38854 DLT1YMR126C 1029 nt2.57□□□□□ -2
TDA11P38854 FYV6YNL133C 522 nt2.57□□□□□ -2
TDA11P38854 MRPL17YNL252C 846 nt2.57□□□□□ -2
TDA11P38854 MPP6YNR024W 561 nt2.57□□□□□ -2
TDA11P38854 GCY1YOR120W 939 nt2.57□□□□□ -2
TDA11P38854 THI80YOR143C 960 nt2.57□□□□□ -2
TDA11P38854 IRC13YOR235W 315 nt2.57□□□□□ -2
TDA11P38854 YOR277CYOR277C 309 nt2.57□□□□□ -2
TDA11P38854 JID1YPR061C 906 nt2.57□□□□□ -2
TDA11P38854 TRM82YDR165W 1335 nt2.57□□□□□ -2
TDA11P38854 CSF1YLR087C 8877 nt2.57□□□□□ -2
TDA11P38854 YBR259WYBR259W 2067 nt2.57□□□□□ -2
TDA11P38854 SWC4YGR002C 1431 nt2.57□□□□□ -2
TDA11P38854 AI2Q0055 2565 nt2.56□□□□□ -2
TDA11P38854 DSE1YER124C 1722 nt2.56□□□□□ -2
TDA11P38854 ARP8YOR141C 2646 nt2.56□□□□□ -2
TDA11P38854 NET1YJL076W 3570 nt2.56□□□□□ -2
TDA11P38854 ERP3YDL018C 678 nt2.56□□□□□ -2
TDA11P38854 DIG2YDR480W 972 nt2.56□□□□□ -2
TDA11P38854 HTD2YHR067W 843 nt2.56□□□□□ -2
TDA11P38854 YIL054WYIL054W 318 nt2.56□□□□□ -2
TDA11P38854 YIR036W-AYIR036W-A 402 nt2.56□□□□□ -2
TDA11P38854 LSM8YJR022W 330 nt2.56□□□□□ -2
TDA11P38854 CCE1YKL011C 1062 nt2.56□□□□□ -2
TDA11P38854 TPT1YOL102C 693 nt2.56□□□□□ -2
TDA11P38854 YBR013CYBR013C 390 nt2.56□□□□□ -2
TDA11P38854 GEA1YJR031C 4227 nt2.56□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms