Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YDR537CYDR537C 606 nt4.29□□□□□ -1.72
PUB1P32588 RPB9YGL070C 369 nt4.29□□□□□ -1.72
PUB1P32588 HIS5YIL116W 1158 nt4.29□□□□□ -1.72
PUB1P32588 RMP1YLR145W 606 nt4.29□□□□□ -1.72
PUB1P32588 YBL108WYBL108W 306 nt4.29□□□□□ -1.72
PUB1P32588 YOR131CYOR131C 657 nt4.29□□□□□ -1.72
PUB1P32588 VID30YGL227W 2877 nt4.29□□□□□ -1.72
PUB1P32588 NTH2YBR001C 2343 nt4.29□□□□□ -1.72
PUB1P32588 MED1YPR070W 1701 nt4.29□□□□□ -1.72
PUB1P32588 VID22YLR373C 2706 nt4.29□□□□□ -1.72 RIP-Chip
PUB1P32588 YGR117CYGR117C 1431 nt4.29□□□□□ -1.72
PUB1P32588 GPI17YDR434W 1605 nt4.28□□□□□ -1.72
PUB1P32588 SHE4YOR035C 2370 nt4.28□□□□□ -1.72 RIP-Chip
PUB1P32588 SPB4YFL002C 1821 nt4.28□□□□□ -1.72
PUB1P32588 RPN6YDL097C 1305 nt4.28□□□□□ -1.72
PUB1P32588 PUF2YPR042C 3228 nt4.28□□□□□ -1.72 RIP-Chip
PUB1P32588 YEL053W-AYEL053W-A 348 nt4.28□□□□□ -1.72
PUB1P32588 YFR035CYFR035C 345 nt4.28□□□□□ -1.72
PUB1P32588 RPA34YJL148W 702 nt4.28□□□□□ -1.72
PUB1P32588 TEN1YLR010C 483 nt4.28□□□□□ -1.72
PUB1P32588 ECM15YBL001C 315 nt4.28□□□□□ -1.72
PUB1P32588 YMR316C-AYMR316C-A 312 nt4.28□□□□□ -1.72
PUB1P32588 BIL1YOR304C-A 231 nt4.28□□□□□ -1.72
PUB1P32588 FEX1YOR390W 1128 nt4.28□□□□□ -1.72 RIP-Chip
PUB1P32588 GWT1YJL091C 1473 nt4.28□□□□□ -1.72 RIP-Chip
PUB1P32588 VBA2YBR293W 1425 nt4.28□□□□□ -1.72 RIP-Chip
PUB1P32588 HPR1YDR138W 2259 nt4.28□□□□□ -1.72
PUB1P32588 MAG2YLR427W 2013 nt4.28□□□□□ -1.73
PUB1P32588 IRC10YOL015W 1761 nt4.27□□□□□ -1.73
PUB1P32588 TUB3YML124C 1338 nt4.27□□□□□ -1.73
PUB1P32588 TUL1YKL034W 2277 nt4.27□□□□□ -1.73
PUB1P32588 TPO5YKL174C 1857 nt4.27□□□□□ -1.73 RIP-Chip
PUB1P32588 YDR090CYDR090C 933 nt4.27□□□□□ -1.73 RIP-Chip
PUB1P32588 YDR524C-AYDR524C-A 120 nt4.27□□□□□ -1.73
PUB1P32588 SMX2YFL017W-A 234 nt4.27□□□□□ -1.73
PUB1P32588 YGR190CYGR190C 366 nt4.27□□□□□ -1.73
PUB1P32588 APQ12YIL040W 417 nt4.27□□□□□ -1.73 RIP-Chip
PUB1P32588 RIM9YMR063W 720 nt4.27□□□□□ -1.73
PUB1P32588 ESF2YNR054C 951 nt4.27□□□□□ -1.73
PUB1P32588 YOR011W-AYOR011W-A 207 nt4.27□□□□□ -1.73
PUB1P32588 TOM5YPR133W-A 153 nt4.27□□□□□ -1.73
PUB1P32588 PDR15YDR406W 4590 nt4.26□□□□□ -1.73 RIP-Chip
PUB1P32588 LEU1YGL009C 2340 nt4.26□□□□□ -1.73
PUB1P32588 AHA1YDR214W 1053 nt4.26□□□□□ -1.73
PUB1P32588 TCD1YHR003C 1290 nt4.26□□□□□ -1.73
PUB1P32588 YIL024CYIL024C 570 nt4.26□□□□□ -1.73
PUB1P32588 tW(UCA)QtW(UCA)Q 74 nt4.26□□□□□ -1.73
PUB1P32588 YAL031W-AYAL031W-A 309 nt4.26□□□□□ -1.73
PUB1P32588 RPL43BYJR094W-A 279 nt4.26□□□□□ -1.73
PUB1P32588 NNF1YJR112W 606 nt4.26□□□□□ -1.73
PUB1P32588 ATG33YLR356W 594 nt4.26□□□□□ -1.73 RIP-Chip
PUB1P32588 SSN8YNL025C 972 nt4.26□□□□□ -1.73
PUB1P32588 MRPL50YNR022C 420 nt4.26□□□□□ -1.73
PUB1P32588 ARC40YBR234C 1155 nt4.26□□□□□ -1.73
PUB1P32588 AIM14YGL160W 1713 nt4.26□□□□□ -1.73
PUB1P32588 TAF5YBR198C 2397 nt4.26□□□□□ -1.73
PUB1P32588 MSS4YDR208W 2340 nt4.25□□□□□ -1.73 RIP-Chip
PUB1P32588 SPR6YER115C 576 nt4.25□□□□□ -1.73
PUB1P32588 PHS1YJL097W 654 nt4.25□□□□□ -1.73 RIP-Chip
PUB1P32588 YAL037WYAL037W 804 nt4.25□□□□□ -1.73
PUB1P32588 MAL33YBR297W 1407 nt4.25□□□□□ -1.73
PUB1P32588 snR51snR51 107 nt4.25□□□□□ -1.73
PUB1P32588 IMA1YGR287C 1770 nt4.25□□□□□ -1.73
PUB1P32588 CDC48YDL126C 2508 nt4.24□□□□□ -1.73 RIP-Chip
PUB1P32588 RTR2YDR066C 591 nt4.24□□□□□ -1.73
PUB1P32588 GPP1YIL053W 753 nt4.24□□□□□ -1.73
PUB1P32588 YJL202CYJL202C 348 nt4.24□□□□□ -1.73
PUB1P32588 AIM26YKL037W 357 nt4.24□□□□□ -1.73
PUB1P32588 YKL069WYKL069W 543 nt4.24□□□□□ -1.73
PUB1P32588 TDA8YAL064C-A 381 nt4.24□□□□□ -1.73
PUB1P32588 LCL2YLR104W 396 nt4.24□□□□□ -1.73
PUB1P32588 GRE2YOL151W 1029 nt4.24□□□□□ -1.73 RIP-Chip
PUB1P32588 YPL114WYPL114W 420 nt4.24□□□□□ -1.73
PUB1P32588 YPR059CYPR059C 387 nt4.24□□□□□ -1.73
PUB1P32588 FUS1YCL027W 1539 nt4.24□□□□□ -1.73
PUB1P32588 DOA1YKL213C 2148 nt4.24□□□□□ -1.73
PUB1P32588 YLR152CYLR152C 1731 nt4.24□□□□□ -1.73 RIP-Chip
PUB1P32588 UBA2YDR390C 1911 nt4.23□□□□□ -1.73
PUB1P32588 MON1YGL124C 1935 nt4.23□□□□□ -1.73
PUB1P32588 KAR9YPL269W 1935 nt4.23□□□□□ -1.73
PUB1P32588 RTS1YOR014W 2274 nt4.23□□□□□ -1.73 RIP-Chip
PUB1P32588 VHR2YER064C 1518 nt4.23□□□□□ -1.73 RIP-Chip
PUB1P32588 PRP11YDL043C 801 nt4.23□□□□□ -1.73
PUB1P32588 YDR194W-AYDR194W-A 153 nt4.23□□□□□ -1.73
PUB1P32588 RIP1YEL024W 648 nt4.23□□□□□ -1.73 RIP-Chip
PUB1P32588 YGL041CYGL041C 204 nt4.23□□□□□ -1.73
PUB1P32588 HYR1YIR037W 492 nt4.23□□□□□ -1.73 RIP-Chip
PUB1P32588 IDP2YLR174W 1239 nt4.23□□□□□ -1.73
PUB1P32588 YBL006W-AYBL006W-A 150 nt4.23□□□□□ -1.73
PUB1P32588 TMC1YOR052C 453 nt4.23□□□□□ -1.73 RIP-Chip
PUB1P32588 FSH3YOR280C 801 nt4.23□□□□□ -1.73
PUB1P32588 TUB2YFL037W 1374 nt4.23□□□□□ -1.73 RIP-Chip
PUB1P32588 SOF1YLL011W 1470 nt4.23□□□□□ -1.73
PUB1P32588 GMC1YDR506C 1827 nt4.23□□□□□ -1.73
PUB1P32588 SSB2YNL209W 1842 nt4.23□□□□□ -1.73 RIP-Chip
PUB1P32588 ROY1YMR258C 1662 nt4.22□□□□□ -1.73
PUB1P32588 FMP25YLR077W 1752 nt4.22□□□□□ -1.73
PUB1P32588 SEC27YGL137W 2670 nt4.22□□□□□ -1.73
PUB1P32588 SYP1YCR030C 2613 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)CtK(CUU)C 73 nt4.22□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms