Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 YGR161W-CYGR161W-C 279 nt4.03□□□□□ -1.76
HCA4P20448 YJR037WYJR037W 384 nt4.03□□□□□ -1.76
HCA4P20448 IES3YLR052W 753 nt4.03□□□□□ -1.76
HCA4P20448 IDP2YLR174W 1239 nt4.03□□□□□ -1.76
HCA4P20448 COQ9YLR201C 783 nt4.03□□□□□ -1.76
HCA4P20448 YOR203WYOR203W 354 nt4.03□□□□□ -1.76
HCA4P20448 FMP23YBR047W 528 nt4.03□□□□□ -1.76
HCA4P20448 FYV5YCL058C 459 nt4.03□□□□□ -1.76
HCA4P20448 ARP5YNL059C 2268 nt4.03□□□□□ -1.76
HCA4P20448 NUP85YJR042W 2235 nt4.03□□□□□ -1.76
HCA4P20448 MIP6YHR015W 1980 nt4.03□□□□□ -1.76
HCA4P20448 VIP1YLR410W 3441 nt4.03□□□□□ -1.76
HCA4P20448 ABP140YOR239W 1887 nt4.03□□□□□ -1.77
HCA4P20448 ALA1YOR335C 2877 nt4.02□□□□□ -1.77
HCA4P20448 SPT6YGR116W 4356 nt4.02□□□□□ -1.77
HCA4P20448 MFA1YDR461W 111 nt4.02□□□□□ -1.77
HCA4P20448 YER006C-AYER006C-A 318 nt4.02□□□□□ -1.77
HCA4P20448 YAR047CYAR047C 321 nt4.02□□□□□ -1.77
HCA4P20448 YMR001C-AYMR001C-A 231 nt4.02□□□□□ -1.77
HCA4P20448 RIM11YMR139W 1113 nt4.02□□□□□ -1.77
HCA4P20448 YMR193C-AYMR193C-A 387 nt4.02□□□□□ -1.77
HCA4P20448 YOR029WYOR029W 336 nt4.02□□□□□ -1.77
HCA4P20448 ADF1YCL058W-A 342 nt4.02□□□□□ -1.77
HCA4P20448 FKH2YNL068C 2589 nt4.02□□□□□ -1.77
HCA4P20448 ARP4YJL081C 1470 nt4.01□□□□□ -1.77
HCA4P20448 PIN4YBL051C 2007 nt4.01□□□□□ -1.77
HCA4P20448 snR5snR5 204 nt4.01□□□□□ -1.77
HCA4P20448 FMP10YER182W 735 nt4.01□□□□□ -1.77
HCA4P20448 TAM41YGR046W 1158 nt4.01□□□□□ -1.77
HCA4P20448 QCR10YHR001W-A 234 nt4.01□□□□□ -1.77
HCA4P20448 POG1YIL122W 1056 nt4.01□□□□□ -1.77
HCA4P20448 ERP1YAR002C-A 660 nt4.01□□□□□ -1.77
HCA4P20448 INN1YNL152W 1230 nt4.01□□□□□ -1.77
HCA4P20448 YOR199WYOR199W 330 nt4.01□□□□□ -1.77
HCA4P20448 YBR137WYBR137W 540 nt4.01□□□□□ -1.77
HCA4P20448 KIP3YGL216W 2418 nt4.01□□□□□ -1.77
HCA4P20448 snR9snR9 187 nt4□□□□□ -1.77
HCA4P20448 ATG31YDR022C 591 nt4□□□□□ -1.77
HCA4P20448 MTC3YGL226W 372 nt4□□□□□ -1.77
HCA4P20448 DSE2YHR143W 978 nt4□□□□□ -1.77
HCA4P20448 SOP4YJL192C 705 nt4□□□□□ -1.77
HCA4P20448 ATG10YLL042C 504 nt4□□□□□ -1.77
HCA4P20448 SEC22YLR268W 645 nt4□□□□□ -1.77
HCA4P20448 RFC3YNL290W 1023 nt4□□□□□ -1.77
HCA4P20448 MSN1YOL116W 1149 nt4□□□□□ -1.77
HCA4P20448 RAD26YJR035W 3258 nt4□□□□□ -1.77
HCA4P20448 VID27YNL212W 2349 nt4□□□□□ -1.77
HCA4P20448 MCD4YKL165C 2760 nt4□□□□□ -1.77
HCA4P20448 AVT5YBL089W 1380 nt4□□□□□ -1.77
HCA4P20448 TAF6YGL112C 1551 nt3.99□□□□□ -1.77
HCA4P20448 SUC2YIL162W 1599 nt3.99□□□□□ -1.77
HCA4P20448 MIG3YER028C 1185 nt3.99□□□□□ -1.77
HCA4P20448 TPM2YIL138C 486 nt3.99□□□□□ -1.77
HCA4P20448 TMA19YKL056C 504 nt3.99□□□□□ -1.77
HCA4P20448 RPL17AYKL180W 555 nt3.99□□□□□ -1.77
HCA4P20448 YLR101CYLR101C 396 nt3.99□□□□□ -1.77
HCA4P20448 HRI1YLR301W 735 nt3.99□□□□□ -1.77
HCA4P20448 SWS2YNL081C 432 nt3.99□□□□□ -1.77
HCA4P20448 SWM2YNR004W 441 nt3.99□□□□□ -1.77
HCA4P20448 GCY1YOR120W 939 nt3.99□□□□□ -1.77
HCA4P20448 SLA1YBL007C 3735 nt3.99□□□□□ -1.77
HCA4P20448 GPI10YGL142C 1851 nt3.98□□□□□ -1.77
HCA4P20448 ASI1YMR119W 1875 nt3.98□□□□□ -1.77
HCA4P20448 ERG11YHR007C 1593 nt3.98□□□□□ -1.77
HCA4P20448 GPI1YGR216C 1830 nt3.98□□□□□ -1.77
HCA4P20448 snR68snR68 136 nt3.98□□□□□ -1.77
HCA4P20448 HUR1YGL168W 333 nt3.98□□□□□ -1.77
HCA4P20448 COX13YGL191W 390 nt3.98□□□□□ -1.77
HCA4P20448 SLX9YGR081C 633 nt3.98□□□□□ -1.77
HCA4P20448 YAL004WYAL004W 648 nt3.98□□□□□ -1.77
HCA4P20448 VPH2YKL119C 648 nt3.98□□□□□ -1.77
HCA4P20448 YAR053WYAR053W 297 nt3.98□□□□□ -1.77
HCA4P20448 YNL235CYNL235C 432 nt3.98□□□□□ -1.77
HCA4P20448 YNR021WYNR021W 1215 nt3.98□□□□□ -1.77
HCA4P20448 YPL119C-AYPL119C-A 264 nt3.98□□□□□ -1.77
HCA4P20448 YPR170CYPR170C 336 nt3.98□□□□□ -1.77
HCA4P20448 VPS53YJL029C 2469 nt3.97□□□□□ -1.77
HCA4P20448 PEP7YDR323C 1548 nt3.97□□□□□ -1.77
HCA4P20448 YDR526CYDR526C 471 nt3.97□□□□□ -1.77
HCA4P20448 YER079WYER079W 633 nt3.97□□□□□ -1.77
HCA4P20448 CGR1YGL029W 363 nt3.97□□□□□ -1.77
HCA4P20448 YIL029CYIL029C 429 nt3.97□□□□□ -1.77
HCA4P20448 ASG7YJL170C 630 nt3.97□□□□□ -1.77
HCA4P20448 ARC18YLR370C 537 nt3.97□□□□□ -1.77
HCA4P20448 DDR48YMR173W 1293 nt3.97□□□□□ -1.77
HCA4P20448 YKL050CYKL050C 2769 nt3.97□□□□□ -1.77
HCA4P20448 NUP159YIL115C 4383 nt3.97□□□□□ -1.77
HCA4P20448 OSH3YHR073W 2991 nt3.96□□□□□ -1.77
HCA4P20448 VPS33YLR396C 2076 nt3.96□□□□□ -1.77
HCA4P20448 APL4YPR029C 2499 nt3.96□□□□□ -1.78
HCA4P20448 YDR269CYDR269C 324 nt3.96□□□□□ -1.78
HCA4P20448 IES5YER092W 378 nt3.96□□□□□ -1.78
HCA4P20448 YHR050W-AYHR050W-A 171 nt3.96□□□□□ -1.78
HCA4P20448 YIL115W-AYIL115W-A 372 nt3.96□□□□□ -1.78
HCA4P20448 TPK3YKL166C 1197 nt3.96□□□□□ -1.78
HCA4P20448 BUR2YLR226W 1188 nt3.96□□□□□ -1.78
HCA4P20448 NGL1YOL042W 1092 nt3.96□□□□□ -1.78
HCA4P20448 MPD2YOL088C 834 nt3.96□□□□□ -1.78
HCA4P20448 TIR2YOR010C 756 nt3.96□□□□□ -1.78
HCA4P20448 MRPS9YBR146W 837 nt3.96□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms