Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 FAM197Y4-202ENST00000622692 608 ntBASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CSB-PGBD3P0DP91 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 AC245052.3-201ENST00000450182 901 ntBASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 HLA-B-256ENST00000639848 1089 ntBASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.94■■■□□ 2.06
CSB-PGBD3P0DP91 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CSB-PGBD3P0DP91 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CSB-PGBD3P0DP91 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CSB-PGBD3P0DP91 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
CSB-PGBD3P0DP91 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
CSB-PGBD3P0DP91 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
CSB-PGBD3P0DP91 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CSB-PGBD3P0DP91 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.06
CSB-PGBD3P0DP91 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.93■■■□□ 2.06
CSB-PGBD3P0DP91 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 AL589743.5-201ENST00000616611 1050 ntBASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 AC100791.3-201ENST00000617619 330 ntBASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CSB-PGBD3P0DP91 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 C1QBPP2-201ENST00000528754 825 ntBASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CSB-PGBD3P0DP91 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 RPPH1-201ENST00000516869 333 ntBASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CSB-PGBD3P0DP91 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
CSB-PGBD3P0DP91 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.89■■■□□ 2.06
CSB-PGBD3P0DP91 MIR718-201ENST00000390190 70 ntBASIC27.89■■■□□ 2.06
CSB-PGBD3P0DP91 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
CSB-PGBD3P0DP91 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
CSB-PGBD3P0DP91 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CSB-PGBD3P0DP91 PNMA6B-201ENST00000538162 1200 ntBASIC27.89■■■□□ 2.06
CSB-PGBD3P0DP91 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC27.89■■■□□ 2.06
CSB-PGBD3P0DP91 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
CSB-PGBD3P0DP91 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
CSB-PGBD3P0DP91 RNF121-214ENST00000533380 870 ntTSL 3 BASIC27.88■■■□□ 2.05
CSB-PGBD3P0DP91 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC27.88■■■□□ 2.05
CSB-PGBD3P0DP91 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC27.88■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms