Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BEST1O76090 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BEST1O76090 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
BEST1O76090 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BEST1O76090 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
BEST1O76090 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
BEST1O76090 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
BEST1O76090 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.12■■□□□ 1.13
BEST1O76090 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
BEST1O76090 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.12■■□□□ 1.13
BEST1O76090 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
BEST1O76090 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BEST1O76090 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
BEST1O76090 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.12■■□□□ 1.13
BEST1O76090 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.12■■□□□ 1.13
BEST1O76090 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.12■■□□□ 1.13
BEST1O76090 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
BEST1O76090 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.12■■□□□ 1.13
BEST1O76090 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.12■■□□□ 1.13
BEST1O76090 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BEST1O76090 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BEST1O76090 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BEST1O76090 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
BEST1O76090 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BEST1O76090 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
BEST1O76090 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.11■■□□□ 1.13
BEST1O76090 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.11■■□□□ 1.13
BEST1O76090 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
BEST1O76090 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.11■■□□□ 1.13
BEST1O76090 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.11■■□□□ 1.13
BEST1O76090 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
BEST1O76090 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.11■■□□□ 1.13
BEST1O76090 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.11■■□□□ 1.13
BEST1O76090 TERF1P5-201ENST00000477545 1207 ntBASIC22.11■■□□□ 1.13
BEST1O76090 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BEST1O76090 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.11■■□□□ 1.13
BEST1O76090 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.11■■□□□ 1.13
BEST1O76090 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BEST1O76090 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
BEST1O76090 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
BEST1O76090 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BEST1O76090 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BEST1O76090 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
BEST1O76090 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BEST1O76090 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.1■■□□□ 1.13
BEST1O76090 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.1■■□□□ 1.13
BEST1O76090 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
BEST1O76090 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
BEST1O76090 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.1■■□□□ 1.13
BEST1O76090 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.1■■□□□ 1.13
BEST1O76090 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
BEST1O76090 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.1■■□□□ 1.13
BEST1O76090 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
BEST1O76090 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
BEST1O76090 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BEST1O76090 RBM17P2-201ENST00000616397 1405 ntBASIC22.09■■□□□ 1.13
BEST1O76090 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.09■■□□□ 1.13
BEST1O76090 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
BEST1O76090 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
BEST1O76090 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.09■■□□□ 1.13
BEST1O76090 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BEST1O76090 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
BEST1O76090 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
BEST1O76090 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
BEST1O76090 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
BEST1O76090 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
BEST1O76090 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
BEST1O76090 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
BEST1O76090 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.08■■□□□ 1.13
BEST1O76090 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.08■■□□□ 1.13
BEST1O76090 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
BEST1O76090 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.08■■□□□ 1.13
BEST1O76090 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
BEST1O76090 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.08■■□□□ 1.13
BEST1O76090 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.08■■□□□ 1.13
BEST1O76090 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.08■■□□□ 1.13
BEST1O76090 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
BEST1O76090 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
BEST1O76090 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.08■■□□□ 1.12
BEST1O76090 Z98882.1-201ENST00000622160 2253 ntBASIC22.08■■□□□ 1.12
BEST1O76090 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
BEST1O76090 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.07■■□□□ 1.12
BEST1O76090 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
BEST1O76090 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.07■■□□□ 1.12
BEST1O76090 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.07■■□□□ 1.12
BEST1O76090 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.07■■□□□ 1.12
BEST1O76090 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.07■■□□□ 1.12
BEST1O76090 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.07■■□□□ 1.12
BEST1O76090 AL050303.2-201ENST00000619798 666 ntBASIC22.07■■□□□ 1.12
BEST1O76090 AC231657.2-201ENST00000624556 255 ntBASIC22.07■■□□□ 1.12
BEST1O76090 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms