Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 AC005229.4-201ENST00000610085 2198 ntBASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHKB-CPT1BH3BT56 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CHKB-CPT1BH3BT56 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC11.71□□□□□ -0.54
CHKB-CPT1BH3BT56 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHKB-CPT1BH3BT56 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHKB-CPT1BH3BT56 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHKB-CPT1BH3BT56 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC11.71□□□□□ -0.54
CHKB-CPT1BH3BT56 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHKB-CPT1BH3BT56 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CHKB-CPT1BH3BT56 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 COMT-203ENST00000403184 2217 ntTSL 2 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC11.7□□□□□ -0.54
CHKB-CPT1BH3BT56 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 RPS2-209ENST00000529806 993 ntTSL 3 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms