Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCA1A8K7I4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCA1A8K7I4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CLCA1A8K7I4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.52■□□□□ 0.71
CLCA1A8K7I4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.51■□□□□ 0.71
CLCA1A8K7I4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 LINC02228-203ENST00000641970 1355 ntBASIC19.5■□□□□ 0.71
CLCA1A8K7I4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 CCDC92B-201ENST00000575506 885 ntBASIC19.5■□□□□ 0.71
CLCA1A8K7I4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 OXCT2P1-201ENST00000447263 1535 ntBASIC19.5■□□□□ 0.71
CLCA1A8K7I4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA1A8K7I4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 DUX4L2-201ENST00000561772 1275 ntBASIC19.49■□□□□ 0.71
CLCA1A8K7I4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 DUX4L6-201ENST00000626483 1275 ntBASIC19.49■□□□□ 0.71
CLCA1A8K7I4 DUX4L1-201ENST00000627662 1275 ntBASIC19.49■□□□□ 0.71
CLCA1A8K7I4 DUX4L8-201ENST00000629013 1275 ntBASIC19.49■□□□□ 0.71
CLCA1A8K7I4 DUX4L3-201ENST00000630187 1275 ntBASIC19.49■□□□□ 0.71
CLCA1A8K7I4 DUX4L7-201ENST00000630678 1275 ntBASIC19.49■□□□□ 0.71
CLCA1A8K7I4 DUX4L5-201ENST00000630834 1275 ntBASIC19.49■□□□□ 0.71
CLCA1A8K7I4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA1A8K7I4 LINC01006-201ENST00000333319 2292 ntBASIC19.49■□□□□ 0.71
CLCA1A8K7I4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA1A8K7I4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms