Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV2A0A0B4J234 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV2A0A0B4J234 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV2A0A0B4J234 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV2A0A0B4J234 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV2A0A0B4J234 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV2A0A0B4J234 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV2A0A0B4J234 FBXW4P1-201ENST00000426721 2239 ntBASIC15.82■□□□□ 0.12
TRAV2A0A0B4J234 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV2A0A0B4J234 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV2A0A0B4J234 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV2A0A0B4J234 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 KRT19P1-201ENST00000405746 1186 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 AC010141.2-201ENST00000452426 721 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 DUX4L2-201ENST00000561772 1275 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 AC120498.10-201ENST00000621827 505 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 DUX4L6-201ENST00000626483 1275 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 DUX4L1-201ENST00000627662 1275 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 DUX4L8-201ENST00000629013 1275 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 DUX4L3-201ENST00000630187 1275 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 DUX4L7-201ENST00000630678 1275 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 DUX4L5-201ENST00000630834 1275 ntBASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV2A0A0B4J234 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms