Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ssr1Q9CY50 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ssr1Q9CY50 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Ssr1Q9CY50 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.42■■□□□ 1.82
Ssr1Q9CY50 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ssr1Q9CY50 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ssr1Q9CY50 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Ssr1Q9CY50 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Ssr1Q9CY50 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ssr1Q9CY50 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ssr1Q9CY50 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Ssr1Q9CY50 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ssr1Q9CY50 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ssr1Q9CY50 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ssr1Q9CY50 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ssr1Q9CY50 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ssr1Q9CY50 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ssr1Q9CY50 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Ssr1Q9CY50 Gm16148-201ENSMUST00000119653 893 ntBASIC26.34■■□□□ 1.81
Ssr1Q9CY50 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ssr1Q9CY50 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ssr1Q9CY50 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
Ssr1Q9CY50 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.31■■□□□ 1.8
Ssr1Q9CY50 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.3■■□□□ 1.8
Ssr1Q9CY50 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ssr1Q9CY50 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Ssr1Q9CY50 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ssr1Q9CY50 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ssr1Q9CY50 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ssr1Q9CY50 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ssr1Q9CY50 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.27■■□□□ 1.8
Ssr1Q9CY50 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ssr1Q9CY50 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ssr1Q9CY50 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ssr1Q9CY50 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ssr1Q9CY50 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ssr1Q9CY50 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
Ssr1Q9CY50 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ssr1Q9CY50 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.24■■□□□ 1.79
Ssr1Q9CY50 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ssr1Q9CY50 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ssr1Q9CY50 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ssr1Q9CY50 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ssr1Q9CY50 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ssr1Q9CY50 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ssr1Q9CY50 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Ssr1Q9CY50 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ssr1Q9CY50 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ssr1Q9CY50 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ssr1Q9CY50 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ssr1Q9CY50 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ssr1Q9CY50 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ssr1Q9CY50 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ssr1Q9CY50 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Ssr1Q9CY50 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ssr1Q9CY50 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Ssr1Q9CY50 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ssr1Q9CY50 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.13■■□□□ 1.77
Ssr1Q9CY50 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Ssr1Q9CY50 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ssr1Q9CY50 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.12■■□□□ 1.77
Ssr1Q9CY50 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.11■■□□□ 1.77
Ssr1Q9CY50 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ssr1Q9CY50 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ssr1Q9CY50 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ssr1Q9CY50 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ssr1Q9CY50 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Ssr1Q9CY50 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
Ssr1Q9CY50 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ssr1Q9CY50 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ssr1Q9CY50 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ssr1Q9CY50 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ssr1Q9CY50 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Ssr1Q9CY50 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
Ssr1Q9CY50 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.07■■□□□ 1.76
Ssr1Q9CY50 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ssr1Q9CY50 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ssr1Q9CY50 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.07■■□□□ 1.76
Ssr1Q9CY50 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ssr1Q9CY50 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Ssr1Q9CY50 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ssr1Q9CY50 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.04■■□□□ 1.76
Ssr1Q9CY50 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ssr1Q9CY50 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ssr1Q9CY50 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ssr1Q9CY50 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ssr1Q9CY50 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ssr1Q9CY50 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ssr1Q9CY50 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ssr1Q9CY50 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ssr1Q9CY50 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ssr1Q9CY50 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
Ssr1Q9CY50 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ssr1Q9CY50 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ssr1Q9CY50 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Ssr1Q9CY50 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ssr1Q9CY50 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.98■■□□□ 1.75
Ssr1Q9CY50 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ssr1Q9CY50 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ssr1Q9CY50 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms