Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdhr1Q8VHP6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cdhr1Q8VHP6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdhr1Q8VHP6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdhr1Q8VHP6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Cdhr1Q8VHP6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cdhr1Q8VHP6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.4■■□□□ 1.5
Cdhr1Q8VHP6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Cdhr1Q8VHP6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cdhr1Q8VHP6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cdhr1Q8VHP6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cdhr1Q8VHP6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cdhr1Q8VHP6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cdhr1Q8VHP6 Gm6821-201ENSMUST00000107540 542 ntBASIC24.37■■□□□ 1.49
Cdhr1Q8VHP6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cdhr1Q8VHP6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Cdhr1Q8VHP6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cdhr1Q8VHP6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Cdhr1Q8VHP6 Gm8503-201ENSMUST00000118131 455 ntBASIC24.35■■□□□ 1.49
Cdhr1Q8VHP6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cdhr1Q8VHP6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cdhr1Q8VHP6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.33■■□□□ 1.49
Cdhr1Q8VHP6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.32■■□□□ 1.48
Cdhr1Q8VHP6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cdhr1Q8VHP6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cdhr1Q8VHP6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cdhr1Q8VHP6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.31■■□□□ 1.48
Cdhr1Q8VHP6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdhr1Q8VHP6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdhr1Q8VHP6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cdhr1Q8VHP6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Cdhr1Q8VHP6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cdhr1Q8VHP6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cdhr1Q8VHP6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Cdhr1Q8VHP6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cdhr1Q8VHP6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cdhr1Q8VHP6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.24■■□□□ 1.47
Cdhr1Q8VHP6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cdhr1Q8VHP6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cdhr1Q8VHP6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cdhr1Q8VHP6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cdhr1Q8VHP6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cdhr1Q8VHP6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.22■■□□□ 1.47
Cdhr1Q8VHP6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cdhr1Q8VHP6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cdhr1Q8VHP6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cdhr1Q8VHP6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Cdhr1Q8VHP6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cdhr1Q8VHP6 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.2■■□□□ 1.46
Cdhr1Q8VHP6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.19■■□□□ 1.46
Cdhr1Q8VHP6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cdhr1Q8VHP6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cdhr1Q8VHP6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cdhr1Q8VHP6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cdhr1Q8VHP6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cdhr1Q8VHP6 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.14■■□□□ 1.45
Cdhr1Q8VHP6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cdhr1Q8VHP6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cdhr1Q8VHP6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Cdhr1Q8VHP6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cdhr1Q8VHP6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cdhr1Q8VHP6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Cdhr1Q8VHP6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
Cdhr1Q8VHP6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Cdhr1Q8VHP6 Nkain2-201ENSMUST00000092602 558 ntBASIC24.11■■□□□ 1.45
Cdhr1Q8VHP6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cdhr1Q8VHP6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.1■■□□□ 1.45
Cdhr1Q8VHP6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cdhr1Q8VHP6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Cdhr1Q8VHP6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cdhr1Q8VHP6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Cdhr1Q8VHP6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Cdhr1Q8VHP6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Cdhr1Q8VHP6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cdhr1Q8VHP6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.07■■□□□ 1.44
Cdhr1Q8VHP6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.07■■□□□ 1.44
Cdhr1Q8VHP6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cdhr1Q8VHP6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cdhr1Q8VHP6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cdhr1Q8VHP6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Cdhr1Q8VHP6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Cdhr1Q8VHP6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.04■■□□□ 1.44
Cdhr1Q8VHP6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.04■■□□□ 1.44
Cdhr1Q8VHP6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.03■■□□□ 1.44
Cdhr1Q8VHP6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Cdhr1Q8VHP6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.02■■□□□ 1.44
Cdhr1Q8VHP6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
Cdhr1Q8VHP6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cdhr1Q8VHP6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cdhr1Q8VHP6 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.99■■□□□ 1.43
Cdhr1Q8VHP6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cdhr1Q8VHP6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.97■■□□□ 1.43
Cdhr1Q8VHP6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cdhr1Q8VHP6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdhr1Q8VHP6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Cdhr1Q8VHP6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cdhr1Q8VHP6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cdhr1Q8VHP6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cdhr1Q8VHP6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cdhr1Q8VHP6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms