Protein–RNA interactions for Protein: Q8VCG9

Rfxap, Regulatory factor X-associated protein, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfxapQ8VCG9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RfxapQ8VCG9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RfxapQ8VCG9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RfxapQ8VCG9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RfxapQ8VCG9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RfxapQ8VCG9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RfxapQ8VCG9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RfxapQ8VCG9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RfxapQ8VCG9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RfxapQ8VCG9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RfxapQ8VCG9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.44■□□□□ 0.7
RfxapQ8VCG9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RfxapQ8VCG9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RfxapQ8VCG9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RfxapQ8VCG9 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.42■□□□□ 0.7
RfxapQ8VCG9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RfxapQ8VCG9 Gm16148-201ENSMUST00000119653 893 ntBASIC19.41■□□□□ 0.7
RfxapQ8VCG9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RfxapQ8VCG9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RfxapQ8VCG9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RfxapQ8VCG9 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.4■□□□□ 0.7
RfxapQ8VCG9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RfxapQ8VCG9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RfxapQ8VCG9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
RfxapQ8VCG9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RfxapQ8VCG9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RfxapQ8VCG9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RfxapQ8VCG9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RfxapQ8VCG9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RfxapQ8VCG9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RfxapQ8VCG9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RfxapQ8VCG9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RfxapQ8VCG9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RfxapQ8VCG9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RfxapQ8VCG9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RfxapQ8VCG9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RfxapQ8VCG9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RfxapQ8VCG9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RfxapQ8VCG9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RfxapQ8VCG9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RfxapQ8VCG9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RfxapQ8VCG9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
RfxapQ8VCG9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RfxapQ8VCG9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RfxapQ8VCG9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RfxapQ8VCG9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RfxapQ8VCG9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RfxapQ8VCG9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RfxapQ8VCG9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RfxapQ8VCG9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RfxapQ8VCG9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RfxapQ8VCG9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RfxapQ8VCG9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.26■□□□□ 0.67
RfxapQ8VCG9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RfxapQ8VCG9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RfxapQ8VCG9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RfxapQ8VCG9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RfxapQ8VCG9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RfxapQ8VCG9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.25■□□□□ 0.67
RfxapQ8VCG9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RfxapQ8VCG9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RfxapQ8VCG9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RfxapQ8VCG9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RfxapQ8VCG9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RfxapQ8VCG9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RfxapQ8VCG9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.22■□□□□ 0.67
RfxapQ8VCG9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfxapQ8VCG9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfxapQ8VCG9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.22■□□□□ 0.67
RfxapQ8VCG9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfxapQ8VCG9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RfxapQ8VCG9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RfxapQ8VCG9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RfxapQ8VCG9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.2■□□□□ 0.66
RfxapQ8VCG9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RfxapQ8VCG9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RfxapQ8VCG9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RfxapQ8VCG9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.19■□□□□ 0.66
RfxapQ8VCG9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RfxapQ8VCG9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RfxapQ8VCG9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RfxapQ8VCG9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RfxapQ8VCG9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RfxapQ8VCG9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RfxapQ8VCG9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RfxapQ8VCG9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RfxapQ8VCG9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RfxapQ8VCG9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RfxapQ8VCG9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RfxapQ8VCG9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RfxapQ8VCG9 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.17■□□□□ 0.66
RfxapQ8VCG9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RfxapQ8VCG9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RfxapQ8VCG9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RfxapQ8VCG9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RfxapQ8VCG9 Gm45855-201ENSMUST00000212546 880 ntBASIC19.14■□□□□ 0.65
RfxapQ8VCG9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RfxapQ8VCG9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RfxapQ8VCG9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RfxapQ8VCG9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms