Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Zcchc9Q8R1J3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Zcchc9Q8R1J3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Zcchc9Q8R1J3 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.71■■□□□ 1.55
Zcchc9Q8R1J3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
Zcchc9Q8R1J3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Zcchc9Q8R1J3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Zcchc9Q8R1J3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.7■■□□□ 1.54
Zcchc9Q8R1J3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Zcchc9Q8R1J3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Zcchc9Q8R1J3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Zcchc9Q8R1J3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
Zcchc9Q8R1J3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Zcchc9Q8R1J3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Zcchc9Q8R1J3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Zcchc9Q8R1J3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Zcchc9Q8R1J3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Zcchc9Q8R1J3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.63■■□□□ 1.53
Zcchc9Q8R1J3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Zcchc9Q8R1J3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Zcchc9Q8R1J3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Zcchc9Q8R1J3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Zcchc9Q8R1J3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Zcchc9Q8R1J3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Zcchc9Q8R1J3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Zcchc9Q8R1J3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Zcchc9Q8R1J3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Zcchc9Q8R1J3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Zcchc9Q8R1J3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Zcchc9Q8R1J3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Zcchc9Q8R1J3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Zcchc9Q8R1J3 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.57■■□□□ 1.52
Zcchc9Q8R1J3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.57■■□□□ 1.52
Zcchc9Q8R1J3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.57■■□□□ 1.52
Zcchc9Q8R1J3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.56■■□□□ 1.52
Zcchc9Q8R1J3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Zcchc9Q8R1J3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Zcchc9Q8R1J3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Zcchc9Q8R1J3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Zcchc9Q8R1J3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Zcchc9Q8R1J3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Zcchc9Q8R1J3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Zcchc9Q8R1J3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.53■■□□□ 1.52
Zcchc9Q8R1J3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Zcchc9Q8R1J3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Zcchc9Q8R1J3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Zcchc9Q8R1J3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Zcchc9Q8R1J3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Zcchc9Q8R1J3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.5■■□□□ 1.51
Zcchc9Q8R1J3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Zcchc9Q8R1J3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Zcchc9Q8R1J3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.48■■□□□ 1.51
Zcchc9Q8R1J3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Zcchc9Q8R1J3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.48■■□□□ 1.51
Zcchc9Q8R1J3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Zcchc9Q8R1J3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Zcchc9Q8R1J3 Nkain2-201ENSMUST00000092602 558 ntBASIC24.46■■□□□ 1.51
Zcchc9Q8R1J3 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.46■■□□□ 1.51
Zcchc9Q8R1J3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
Zcchc9Q8R1J3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Zcchc9Q8R1J3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Zcchc9Q8R1J3 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.45■■□□□ 1.5
Zcchc9Q8R1J3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Zcchc9Q8R1J3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zcchc9Q8R1J3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zcchc9Q8R1J3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zcchc9Q8R1J3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Zcchc9Q8R1J3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zcchc9Q8R1J3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zcchc9Q8R1J3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Zcchc9Q8R1J3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.42■■□□□ 1.5
Zcchc9Q8R1J3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zcchc9Q8R1J3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Zcchc9Q8R1J3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Zcchc9Q8R1J3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Zcchc9Q8R1J3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zcchc9Q8R1J3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zcchc9Q8R1J3 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.4■■□□□ 1.5
Zcchc9Q8R1J3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.4■■□□□ 1.5
Zcchc9Q8R1J3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Zcchc9Q8R1J3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.39■■□□□ 1.49
Zcchc9Q8R1J3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Zcchc9Q8R1J3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zcchc9Q8R1J3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Zcchc9Q8R1J3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Zcchc9Q8R1J3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Zcchc9Q8R1J3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.35■■□□□ 1.49
Zcchc9Q8R1J3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zcchc9Q8R1J3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.35■■□□□ 1.49
Zcchc9Q8R1J3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Zcchc9Q8R1J3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Zcchc9Q8R1J3 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.33■■□□□ 1.49
Zcchc9Q8R1J3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Zcchc9Q8R1J3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Zcchc9Q8R1J3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
Zcchc9Q8R1J3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zcchc9Q8R1J3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zcchc9Q8R1J3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zcchc9Q8R1J3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Zcchc9Q8R1J3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms