Protein–RNA interactions for Protein: Q8K449

Abca9, ATP-binding cassette sub-family A member 9, mousemouse

Predictions only

Length 1,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca9Q8K449 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
Abca9Q8K449 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC38.2■■■■□ 3.71
Abca9Q8K449 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC38.2■■■■□ 3.71
Abca9Q8K449 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
Abca9Q8K449 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
Abca9Q8K449 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC38.19■■■■□ 3.7
Abca9Q8K449 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC38.18■■■■□ 3.7
Abca9Q8K449 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC38.18■■■■□ 3.7
Abca9Q8K449 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
Abca9Q8K449 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
Abca9Q8K449 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC38.17■■■■□ 3.7
Abca9Q8K449 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Abca9Q8K449 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Abca9Q8K449 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
Abca9Q8K449 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
Abca9Q8K449 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC38.12■■■■□ 3.69
Abca9Q8K449 Gm11175-201ENSMUST00000116172 543 ntBASIC38.11■■■■□ 3.69
Abca9Q8K449 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
Abca9Q8K449 Gm11599-201ENSMUST00000118720 878 ntBASIC38.06■■■■□ 3.68
Abca9Q8K449 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC38.06■■■■□ 3.68
Abca9Q8K449 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC38.05■■■■□ 3.68
Abca9Q8K449 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC38.05■■■■□ 3.68
Abca9Q8K449 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC38.04■■■■□ 3.68
Abca9Q8K449 Mir6538-201ENSMUST00000183713 110 ntBASIC38.04■■■■□ 3.68
Abca9Q8K449 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC38.04■■■■□ 3.68
Abca9Q8K449 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC38.02■■■■□ 3.68
Abca9Q8K449 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC38.02■■■■□ 3.68
Abca9Q8K449 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC38.01■■■■□ 3.68
Abca9Q8K449 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
Abca9Q8K449 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Abca9Q8K449 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC38■■■■□ 3.67
Abca9Q8K449 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Abca9Q8K449 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Abca9Q8K449 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC37.98■■■■□ 3.67
Abca9Q8K449 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
Abca9Q8K449 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC37.97■■■■□ 3.67
Abca9Q8K449 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Abca9Q8K449 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
Abca9Q8K449 Gm30346-201ENSMUST00000218641 1699 ntBASIC37.95■■■■□ 3.67
Abca9Q8K449 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
Abca9Q8K449 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Abca9Q8K449 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
Abca9Q8K449 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
Abca9Q8K449 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
Abca9Q8K449 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC37.87■■■■□ 3.65
Abca9Q8K449 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC37.87■■■■□ 3.65
Abca9Q8K449 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC37.87■■■■□ 3.65
Abca9Q8K449 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC37.86■■■■□ 3.65
Abca9Q8K449 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC37.83■■■■□ 3.65
Abca9Q8K449 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
Abca9Q8K449 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
Abca9Q8K449 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Abca9Q8K449 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
Abca9Q8K449 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC37.83■■■■□ 3.65
Abca9Q8K449 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Abca9Q8K449 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
Abca9Q8K449 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC37.82■■■■□ 3.65
Abca9Q8K449 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC37.81■■■■□ 3.64
Abca9Q8K449 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Abca9Q8K449 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
Abca9Q8K449 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC37.79■■■■□ 3.64
Abca9Q8K449 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC37.78■■■■□ 3.64
Abca9Q8K449 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC37.76■■■■□ 3.64
Abca9Q8K449 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC37.76■■■■□ 3.63
Abca9Q8K449 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC37.72■■■■□ 3.63
Abca9Q8K449 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC37.71■■■■□ 3.63
Abca9Q8K449 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC37.7■■■■□ 3.63
Abca9Q8K449 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC37.7■■■■□ 3.63
Abca9Q8K449 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC37.69■■■■□ 3.62
Abca9Q8K449 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC37.69■■■■□ 3.62
Abca9Q8K449 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC37.69■■■■□ 3.62
Abca9Q8K449 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
Abca9Q8K449 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
Abca9Q8K449 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC37.66■■■■□ 3.62
Abca9Q8K449 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Abca9Q8K449 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC37.64■■■■□ 3.62
Abca9Q8K449 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC37.62■■■■□ 3.61
Abca9Q8K449 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC37.61■■■■□ 3.61
Abca9Q8K449 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC37.61■■■■□ 3.61
Abca9Q8K449 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Abca9Q8K449 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC37.6■■■■□ 3.61
Abca9Q8K449 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Abca9Q8K449 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC37.58■■■■□ 3.61
Abca9Q8K449 Cap2-205ENSMUST00000225824 1634 ntBASIC37.57■■■■□ 3.61
Abca9Q8K449 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC37.57■■■■□ 3.6
Abca9Q8K449 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
Abca9Q8K449 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC37.56■■■■□ 3.6
Abca9Q8K449 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC37.56■■■■□ 3.6
Abca9Q8K449 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
Abca9Q8K449 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC37.54■■■■□ 3.6
Abca9Q8K449 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC37.53■■■■□ 3.6
Abca9Q8K449 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
Abca9Q8K449 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
Abca9Q8K449 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC37.51■■■■□ 3.59
Abca9Q8K449 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC37.49■■■■□ 3.59
Abca9Q8K449 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Abca9Q8K449 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Abca9Q8K449 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC37.48■■■■□ 3.59
Abca9Q8K449 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC37.47■■■■□ 3.59
Abca9Q8K449 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms