Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
PdgfcQ8CI19 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.17■■■□□ 2.1
PdgfcQ8CI19 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PdgfcQ8CI19 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
PdgfcQ8CI19 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PdgfcQ8CI19 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.12■■■□□ 2.09
PdgfcQ8CI19 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
PdgfcQ8CI19 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.11■■■□□ 2.09
PdgfcQ8CI19 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.1■■■□□ 2.09
PdgfcQ8CI19 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.1■■■□□ 2.09
PdgfcQ8CI19 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PdgfcQ8CI19 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PdgfcQ8CI19 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PdgfcQ8CI19 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PdgfcQ8CI19 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.06■■■□□ 2.08
PdgfcQ8CI19 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PdgfcQ8CI19 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PdgfcQ8CI19 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PdgfcQ8CI19 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PdgfcQ8CI19 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.03■■■□□ 2.08
PdgfcQ8CI19 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
PdgfcQ8CI19 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PdgfcQ8CI19 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
PdgfcQ8CI19 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PdgfcQ8CI19 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PdgfcQ8CI19 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
PdgfcQ8CI19 Nkain2-201ENSMUST00000092602 558 ntBASIC27.99■■■□□ 2.07
PdgfcQ8CI19 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.99■■■□□ 2.07
PdgfcQ8CI19 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PdgfcQ8CI19 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
PdgfcQ8CI19 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
PdgfcQ8CI19 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PdgfcQ8CI19 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PdgfcQ8CI19 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PdgfcQ8CI19 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PdgfcQ8CI19 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
PdgfcQ8CI19 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PdgfcQ8CI19 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.94■■■□□ 2.06
PdgfcQ8CI19 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PdgfcQ8CI19 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PdgfcQ8CI19 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PdgfcQ8CI19 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PdgfcQ8CI19 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PdgfcQ8CI19 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PdgfcQ8CI19 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
PdgfcQ8CI19 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
PdgfcQ8CI19 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PdgfcQ8CI19 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.88■■■□□ 2.05
PdgfcQ8CI19 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PdgfcQ8CI19 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PdgfcQ8CI19 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PdgfcQ8CI19 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PdgfcQ8CI19 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PdgfcQ8CI19 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.85■■■□□ 2.05
PdgfcQ8CI19 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.85■■■□□ 2.05
PdgfcQ8CI19 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
PdgfcQ8CI19 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
PdgfcQ8CI19 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.83■■■□□ 2.05
PdgfcQ8CI19 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PdgfcQ8CI19 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.81■■■□□ 2.04
PdgfcQ8CI19 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
PdgfcQ8CI19 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PdgfcQ8CI19 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
PdgfcQ8CI19 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PdgfcQ8CI19 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PdgfcQ8CI19 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.76■■■□□ 2.03
PdgfcQ8CI19 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PdgfcQ8CI19 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PdgfcQ8CI19 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PdgfcQ8CI19 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PdgfcQ8CI19 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PdgfcQ8CI19 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.69■■■□□ 2.02
PdgfcQ8CI19 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PdgfcQ8CI19 Gm7432-201ENSMUST00000210343 879 ntBASIC27.68■■■□□ 2.02
PdgfcQ8CI19 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
PdgfcQ8CI19 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.66■■■□□ 2.02
PdgfcQ8CI19 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.66■■■□□ 2.02
PdgfcQ8CI19 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PdgfcQ8CI19 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PdgfcQ8CI19 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.65■■■□□ 2.02
PdgfcQ8CI19 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PdgfcQ8CI19 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.64■■■□□ 2.01
PdgfcQ8CI19 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PdgfcQ8CI19 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
PdgfcQ8CI19 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PdgfcQ8CI19 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
PdgfcQ8CI19 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
PdgfcQ8CI19 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
PdgfcQ8CI19 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
PdgfcQ8CI19 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
PdgfcQ8CI19 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PdgfcQ8CI19 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.58■■■□□ 2.01
PdgfcQ8CI19 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.57■■■□□ 2
PdgfcQ8CI19 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
PdgfcQ8CI19 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PdgfcQ8CI19 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.53■■■□□ 2
PdgfcQ8CI19 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.53■■■□□ 2
PdgfcQ8CI19 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.53■■■□□ 2
PdgfcQ8CI19 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.53■■■□□ 2
PdgfcQ8CI19 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.52■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms