Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Rsph6aQ8CDR2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rsph6aQ8CDR2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rsph6aQ8CDR2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rsph6aQ8CDR2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Rsph6aQ8CDR2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Rsph6aQ8CDR2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rsph6aQ8CDR2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rsph6aQ8CDR2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Rsph6aQ8CDR2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC33.1■■■□□ 2.89
Rsph6aQ8CDR2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Rsph6aQ8CDR2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
Rsph6aQ8CDR2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC33.07■■■□□ 2.89
Rsph6aQ8CDR2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
Rsph6aQ8CDR2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Rsph6aQ8CDR2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC33.06■■■□□ 2.88
Rsph6aQ8CDR2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Rsph6aQ8CDR2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Rsph6aQ8CDR2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Rsph6aQ8CDR2 Gm9939-201ENSMUST00000067161 1154 ntBASIC33.05■■■□□ 2.88
Rsph6aQ8CDR2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Rsph6aQ8CDR2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rsph6aQ8CDR2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rsph6aQ8CDR2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Rsph6aQ8CDR2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC33.02■■■□□ 2.88
Rsph6aQ8CDR2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Rsph6aQ8CDR2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Rsph6aQ8CDR2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC33■■■□□ 2.87
Rsph6aQ8CDR2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
Rsph6aQ8CDR2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Rsph6aQ8CDR2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
Rsph6aQ8CDR2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Rsph6aQ8CDR2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Rsph6aQ8CDR2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Rsph6aQ8CDR2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Rsph6aQ8CDR2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Rsph6aQ8CDR2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Rsph6aQ8CDR2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Rsph6aQ8CDR2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC32.93■■■□□ 2.86
Rsph6aQ8CDR2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
Rsph6aQ8CDR2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Rsph6aQ8CDR2 Gm8503-201ENSMUST00000118131 455 ntBASIC32.91■■■□□ 2.86
Rsph6aQ8CDR2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Rsph6aQ8CDR2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
Rsph6aQ8CDR2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Rsph6aQ8CDR2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
Rsph6aQ8CDR2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Rsph6aQ8CDR2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Rsph6aQ8CDR2 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.85■■■□□ 2.85
Rsph6aQ8CDR2 Gm6821-201ENSMUST00000107540 542 ntBASIC32.84■■■□□ 2.85
Rsph6aQ8CDR2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Rsph6aQ8CDR2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Rsph6aQ8CDR2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Rsph6aQ8CDR2 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.83■■■□□ 2.85
Rsph6aQ8CDR2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Rsph6aQ8CDR2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Rsph6aQ8CDR2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
Rsph6aQ8CDR2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Rsph6aQ8CDR2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.79■■■□□ 2.84
Rsph6aQ8CDR2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC32.79■■■□□ 2.84
Rsph6aQ8CDR2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.78■■■□□ 2.84
Rsph6aQ8CDR2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
Rsph6aQ8CDR2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Rsph6aQ8CDR2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Rsph6aQ8CDR2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Rsph6aQ8CDR2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Rsph6aQ8CDR2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Rsph6aQ8CDR2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.71■■■□□ 2.83
Rsph6aQ8CDR2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Rsph6aQ8CDR2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Rsph6aQ8CDR2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Rsph6aQ8CDR2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Rsph6aQ8CDR2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Rsph6aQ8CDR2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Rsph6aQ8CDR2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.66■■■□□ 2.82
Rsph6aQ8CDR2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Rsph6aQ8CDR2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC32.65■■■□□ 2.82
Rsph6aQ8CDR2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Rsph6aQ8CDR2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC32.63■■■□□ 2.81
Rsph6aQ8CDR2 Nkain2-201ENSMUST00000092602 558 ntBASIC32.63■■■□□ 2.81
Rsph6aQ8CDR2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rsph6aQ8CDR2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rsph6aQ8CDR2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rsph6aQ8CDR2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC32.62■■■□□ 2.81
Rsph6aQ8CDR2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Rsph6aQ8CDR2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
Rsph6aQ8CDR2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.59■■■□□ 2.81
Rsph6aQ8CDR2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC32.59■■■□□ 2.81
Rsph6aQ8CDR2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Rsph6aQ8CDR2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rsph6aQ8CDR2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Rsph6aQ8CDR2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
Rsph6aQ8CDR2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC32.53■■■□□ 2.8
Rsph6aQ8CDR2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Rsph6aQ8CDR2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Rsph6aQ8CDR2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Rsph6aQ8CDR2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Rsph6aQ8CDR2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Rsph6aQ8CDR2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32.51■■■□□ 2.79
Rsph6aQ8CDR2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms