Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.45■□□□□ 0.86
Zim1Q8C393 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zim1Q8C393 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zim1Q8C393 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zim1Q8C393 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zim1Q8C393 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Zim1Q8C393 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Zim1Q8C393 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zim1Q8C393 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zim1Q8C393 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Zim1Q8C393 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zim1Q8C393 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zim1Q8C393 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Zim1Q8C393 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Zim1Q8C393 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Zim1Q8C393 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Zim1Q8C393 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Zim1Q8C393 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Zim1Q8C393 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Zim1Q8C393 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zim1Q8C393 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zim1Q8C393 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zim1Q8C393 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.37■□□□□ 0.85
Zim1Q8C393 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.37■□□□□ 0.85
Zim1Q8C393 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zim1Q8C393 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zim1Q8C393 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Zim1Q8C393 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zim1Q8C393 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zim1Q8C393 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.36■□□□□ 0.85
Zim1Q8C393 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zim1Q8C393 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zim1Q8C393 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zim1Q8C393 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.34■□□□□ 0.85
Zim1Q8C393 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Zim1Q8C393 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.34■□□□□ 0.85
Zim1Q8C393 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zim1Q8C393 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zim1Q8C393 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Zim1Q8C393 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Zim1Q8C393 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zim1Q8C393 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zim1Q8C393 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zim1Q8C393 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.31■□□□□ 0.84
Zim1Q8C393 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.31■□□□□ 0.84
Zim1Q8C393 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zim1Q8C393 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zim1Q8C393 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Zim1Q8C393 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zim1Q8C393 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Zim1Q8C393 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Zim1Q8C393 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zim1Q8C393 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zim1Q8C393 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Zim1Q8C393 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Zim1Q8C393 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zim1Q8C393 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.28■□□□□ 0.84
Zim1Q8C393 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Zim1Q8C393 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zim1Q8C393 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Zim1Q8C393 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zim1Q8C393 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Zim1Q8C393 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zim1Q8C393 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zim1Q8C393 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.25■□□□□ 0.83
Zim1Q8C393 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
Zim1Q8C393 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Zim1Q8C393 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zim1Q8C393 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zim1Q8C393 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zim1Q8C393 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.23■□□□□ 0.83
Zim1Q8C393 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zim1Q8C393 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.22■□□□□ 0.83
Zim1Q8C393 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zim1Q8C393 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zim1Q8C393 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zim1Q8C393 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.22■□□□□ 0.83
Zim1Q8C393 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.21■□□□□ 0.83
Zim1Q8C393 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Zim1Q8C393 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zim1Q8C393 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Zim1Q8C393 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zim1Q8C393 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zim1Q8C393 Amer2-203ENSMUST00000225247 2662 ntBASIC20.2■□□□□ 0.82
Zim1Q8C393 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zim1Q8C393 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.19■□□□□ 0.82
Zim1Q8C393 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zim1Q8C393 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Zim1Q8C393 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zim1Q8C393 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zim1Q8C393 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Zim1Q8C393 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zim1Q8C393 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Zim1Q8C393 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Zim1Q8C393 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Zim1Q8C393 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zim1Q8C393 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zim1Q8C393 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zim1Q8C393 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Zim1Q8C393 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms