Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.77■■□□□ 1.4
Skida1Q80YR3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Skida1Q80YR3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.76■■□□□ 1.39
Skida1Q80YR3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC23.76■■□□□ 1.39
Skida1Q80YR3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Skida1Q80YR3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Skida1Q80YR3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.75■■□□□ 1.39
Skida1Q80YR3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Skida1Q80YR3 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Skida1Q80YR3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Skida1Q80YR3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Skida1Q80YR3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Skida1Q80YR3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Skida1Q80YR3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.7■■□□□ 1.38
Skida1Q80YR3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.7■■□□□ 1.38
Skida1Q80YR3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Skida1Q80YR3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Skida1Q80YR3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Skida1Q80YR3 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.66■■□□□ 1.38
Skida1Q80YR3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Skida1Q80YR3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Skida1Q80YR3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.64■■□□□ 1.37
Skida1Q80YR3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
Skida1Q80YR3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Skida1Q80YR3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Skida1Q80YR3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
Skida1Q80YR3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.63■■□□□ 1.37
Skida1Q80YR3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Skida1Q80YR3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Skida1Q80YR3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Skida1Q80YR3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Skida1Q80YR3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Skida1Q80YR3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Skida1Q80YR3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Skida1Q80YR3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Skida1Q80YR3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Skida1Q80YR3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Skida1Q80YR3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.56■■□□□ 1.36
Skida1Q80YR3 Nkain2-201ENSMUST00000092602 558 ntBASIC23.56■■□□□ 1.36
Skida1Q80YR3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Skida1Q80YR3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Skida1Q80YR3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Skida1Q80YR3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
Skida1Q80YR3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Skida1Q80YR3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Skida1Q80YR3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Skida1Q80YR3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.54■■□□□ 1.36
Skida1Q80YR3 Gm7432-201ENSMUST00000210343 879 ntBASIC23.54■■□□□ 1.36
Skida1Q80YR3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Skida1Q80YR3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Skida1Q80YR3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Skida1Q80YR3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Skida1Q80YR3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.52■■□□□ 1.36
Skida1Q80YR3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Skida1Q80YR3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Skida1Q80YR3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Skida1Q80YR3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Skida1Q80YR3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Skida1Q80YR3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Skida1Q80YR3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Skida1Q80YR3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.47■■□□□ 1.35
Skida1Q80YR3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Skida1Q80YR3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Skida1Q80YR3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.47■■□□□ 1.35
Skida1Q80YR3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Skida1Q80YR3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Skida1Q80YR3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.45■■□□□ 1.34
Skida1Q80YR3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Skida1Q80YR3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Skida1Q80YR3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.44■■□□□ 1.34
Skida1Q80YR3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Skida1Q80YR3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Skida1Q80YR3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Skida1Q80YR3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Skida1Q80YR3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Skida1Q80YR3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Skida1Q80YR3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Skida1Q80YR3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
Skida1Q80YR3 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Skida1Q80YR3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.4■■□□□ 1.34
Skida1Q80YR3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
Skida1Q80YR3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
Skida1Q80YR3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
Skida1Q80YR3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Skida1Q80YR3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Skida1Q80YR3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.35■■□□□ 1.33
Skida1Q80YR3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Skida1Q80YR3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms