Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27■■□□□ 1.91
Tspan18Q80WR1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
Tspan18Q80WR1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27■■□□□ 1.91
Tspan18Q80WR1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Tspan18Q80WR1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Tspan18Q80WR1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Tspan18Q80WR1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Tspan18Q80WR1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Tspan18Q80WR1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Tspan18Q80WR1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Tspan18Q80WR1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.96■■□□□ 1.91
Tspan18Q80WR1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Tspan18Q80WR1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Tspan18Q80WR1 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.93■■□□□ 1.9
Tspan18Q80WR1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Tspan18Q80WR1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Tspan18Q80WR1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Tspan18Q80WR1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Tspan18Q80WR1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Tspan18Q80WR1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Tspan18Q80WR1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Tspan18Q80WR1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Tspan18Q80WR1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Tspan18Q80WR1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Tspan18Q80WR1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Tspan18Q80WR1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Tspan18Q80WR1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.86■■□□□ 1.89
Tspan18Q80WR1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Tspan18Q80WR1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Tspan18Q80WR1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Tspan18Q80WR1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Tspan18Q80WR1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.79■■□□□ 1.88
Tspan18Q80WR1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Tspan18Q80WR1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Tspan18Q80WR1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.76■■□□□ 1.87
Tspan18Q80WR1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Tspan18Q80WR1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Tspan18Q80WR1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Tspan18Q80WR1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Tspan18Q80WR1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.73■■□□□ 1.87
Tspan18Q80WR1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Tspan18Q80WR1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.72■■□□□ 1.87
Tspan18Q80WR1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Tspan18Q80WR1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Tspan18Q80WR1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.71■■□□□ 1.87
Tspan18Q80WR1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Tspan18Q80WR1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Tspan18Q80WR1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Tspan18Q80WR1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Tspan18Q80WR1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.67■■□□□ 1.86
Tspan18Q80WR1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Tspan18Q80WR1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Tspan18Q80WR1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Tspan18Q80WR1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Tspan18Q80WR1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Tspan18Q80WR1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Tspan18Q80WR1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Tspan18Q80WR1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Tspan18Q80WR1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.63■■□□□ 1.85
Tspan18Q80WR1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Tspan18Q80WR1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Tspan18Q80WR1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
Tspan18Q80WR1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.59■■□□□ 1.85
Tspan18Q80WR1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Tspan18Q80WR1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.59■■□□□ 1.85
Tspan18Q80WR1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Tspan18Q80WR1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Tspan18Q80WR1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Tspan18Q80WR1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Tspan18Q80WR1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Tspan18Q80WR1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Tspan18Q80WR1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Tspan18Q80WR1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.55■■□□□ 1.84
Tspan18Q80WR1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Tspan18Q80WR1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Tspan18Q80WR1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Tspan18Q80WR1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Tspan18Q80WR1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tspan18Q80WR1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tspan18Q80WR1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tspan18Q80WR1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Tspan18Q80WR1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Tspan18Q80WR1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Tspan18Q80WR1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Tspan18Q80WR1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Tspan18Q80WR1 Zxda-201ENSMUST00000117281 2621 ntBASIC26.44■■□□□ 1.82
Tspan18Q80WR1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.44■■□□□ 1.82
Tspan18Q80WR1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
Tspan18Q80WR1 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.44■■□□□ 1.82
Tspan18Q80WR1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Tspan18Q80WR1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Tspan18Q80WR1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Tspan18Q80WR1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Tspan18Q80WR1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Tspan18Q80WR1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.41■■□□□ 1.82
Tspan18Q80WR1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.41■■□□□ 1.82
Tspan18Q80WR1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Tspan18Q80WR1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Tspan18Q80WR1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.4■■□□□ 1.82
Tspan18Q80WR1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms