Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf38bQ80SY5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf38bQ80SY5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf38bQ80SY5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf38bQ80SY5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Prpf38bQ80SY5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Prpf38bQ80SY5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf38bQ80SY5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf38bQ80SY5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Prpf38bQ80SY5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Prpf38bQ80SY5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.71■■□□□ 1.71
Prpf38bQ80SY5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Prpf38bQ80SY5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Prpf38bQ80SY5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.7■■□□□ 1.7
Prpf38bQ80SY5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
Prpf38bQ80SY5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
Prpf38bQ80SY5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Prpf38bQ80SY5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Prpf38bQ80SY5 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.67■■□□□ 1.7
Prpf38bQ80SY5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Prpf38bQ80SY5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Prpf38bQ80SY5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Prpf38bQ80SY5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prpf38bQ80SY5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf38bQ80SY5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Prpf38bQ80SY5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf38bQ80SY5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf38bQ80SY5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Prpf38bQ80SY5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.61■■□□□ 1.69
Prpf38bQ80SY5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Prpf38bQ80SY5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf38bQ80SY5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Prpf38bQ80SY5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf38bQ80SY5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Prpf38bQ80SY5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.59■■□□□ 1.69
Prpf38bQ80SY5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Prpf38bQ80SY5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Prpf38bQ80SY5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.57■■□□□ 1.68
Prpf38bQ80SY5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Prpf38bQ80SY5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Prpf38bQ80SY5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Prpf38bQ80SY5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Prpf38bQ80SY5 Gm11599-201ENSMUST00000118720 878 ntBASIC25.55■■□□□ 1.68
Prpf38bQ80SY5 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.55■■□□□ 1.68
Prpf38bQ80SY5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Prpf38bQ80SY5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Prpf38bQ80SY5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.53■■□□□ 1.68
Prpf38bQ80SY5 Nkain2-201ENSMUST00000092602 558 ntBASIC25.53■■□□□ 1.68
Prpf38bQ80SY5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
Prpf38bQ80SY5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Prpf38bQ80SY5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Prpf38bQ80SY5 Cap2-205ENSMUST00000225824 1634 ntBASIC25.52■■□□□ 1.68
Prpf38bQ80SY5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Prpf38bQ80SY5 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.51■■□□□ 1.67
Prpf38bQ80SY5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Prpf38bQ80SY5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Prpf38bQ80SY5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Prpf38bQ80SY5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.48■■□□□ 1.67
Prpf38bQ80SY5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Prpf38bQ80SY5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Prpf38bQ80SY5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Prpf38bQ80SY5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Prpf38bQ80SY5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf38bQ80SY5 Gm11175-201ENSMUST00000116172 543 ntBASIC25.44■■□□□ 1.66
Prpf38bQ80SY5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf38bQ80SY5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf38bQ80SY5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Prpf38bQ80SY5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Prpf38bQ80SY5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Prpf38bQ80SY5 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.42■■□□□ 1.66
Prpf38bQ80SY5 Gm15039-201ENSMUST00000118914 875 ntBASIC25.42■■□□□ 1.66
Prpf38bQ80SY5 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.42■■□□□ 1.66
Prpf38bQ80SY5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Prpf38bQ80SY5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Prpf38bQ80SY5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.39■■□□□ 1.66
Prpf38bQ80SY5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Prpf38bQ80SY5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Prpf38bQ80SY5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Prpf38bQ80SY5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.33■■□□□ 1.65
Prpf38bQ80SY5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Prpf38bQ80SY5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.3■■□□□ 1.64
Prpf38bQ80SY5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Prpf38bQ80SY5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Prpf38bQ80SY5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Prpf38bQ80SY5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.28■■□□□ 1.64
Prpf38bQ80SY5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Prpf38bQ80SY5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Prpf38bQ80SY5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Prpf38bQ80SY5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Prpf38bQ80SY5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms