Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30,7■■■□□ 2,51
Pdzrn3Q69ZS0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Pdzrn3Q69ZS0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30,69■■■□□ 2,5
Pdzrn3Q69ZS0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30,68■■■□□ 2,5
Pdzrn3Q69ZS0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30,67■■■□□ 2,5
Pdzrn3Q69ZS0 AC157572.2-201ENSMUST00000226970 908 ntBASIC30,67■■■□□ 2,5
Pdzrn3Q69ZS0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Pdzrn3Q69ZS0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30,67■■■□□ 2,5
Pdzrn3Q69ZS0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30,66■■■□□ 2,5
Pdzrn3Q69ZS0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30,65■■■□□ 2,5
Pdzrn3Q69ZS0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30,65■■■□□ 2,5
Pdzrn3Q69ZS0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30,63■■■□□ 2,49
Pdzrn3Q69ZS0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30,63■■■□□ 2,49
Pdzrn3Q69ZS0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Pdzrn3Q69ZS0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Pdzrn3Q69ZS0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Pdzrn3Q69ZS0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Pdzrn3Q69ZS0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30,57■■■□□ 2,48
Pdzrn3Q69ZS0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Pdzrn3Q69ZS0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Pdzrn3Q69ZS0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Pdzrn3Q69ZS0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30,56■■■□□ 2,48
Pdzrn3Q69ZS0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Pdzrn3Q69ZS0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Pdzrn3Q69ZS0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30,55■■■□□ 2,48
Pdzrn3Q69ZS0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30,55■■■□□ 2,48
Pdzrn3Q69ZS0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Pdzrn3Q69ZS0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30,53■■■□□ 2,48
Pdzrn3Q69ZS0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Pdzrn3Q69ZS0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Pdzrn3Q69ZS0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Pdzrn3Q69ZS0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30,52■■■□□ 2,48
Pdzrn3Q69ZS0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30,52■■■□□ 2,48
Pdzrn3Q69ZS0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30,51■■■□□ 2,47
Pdzrn3Q69ZS0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30,51■■■□□ 2,47
Pdzrn3Q69ZS0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30,51■■■□□ 2,47
Pdzrn3Q69ZS0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30,5■■■□□ 2,47
Pdzrn3Q69ZS0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30,48■■■□□ 2,47
Pdzrn3Q69ZS0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30,47■■■□□ 2,47
Pdzrn3Q69ZS0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Pdzrn3Q69ZS0 Gm42809-201ENSMUST00000198429 1138 ntBASIC30,47■■■□□ 2,47
Pdzrn3Q69ZS0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30,47■■■□□ 2,47
Pdzrn3Q69ZS0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
Pdzrn3Q69ZS0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30,46■■■□□ 2,47
Pdzrn3Q69ZS0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30,46■■■□□ 2,47
Pdzrn3Q69ZS0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Pdzrn3Q69ZS0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30,45■■■□□ 2,47
Pdzrn3Q69ZS0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30,45■■■□□ 2,47
Pdzrn3Q69ZS0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30,44■■■□□ 2,46
Pdzrn3Q69ZS0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Pdzrn3Q69ZS0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30,44■■■□□ 2,46
Pdzrn3Q69ZS0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30,44■■■□□ 2,46
Pdzrn3Q69ZS0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30,42■■■□□ 2,46
Pdzrn3Q69ZS0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30,41■■■□□ 2,46
Pdzrn3Q69ZS0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30,4■■■□□ 2,46
Pdzrn3Q69ZS0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,39■■■□□ 2,46
Pdzrn3Q69ZS0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30,39■■■□□ 2,46
Pdzrn3Q69ZS0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30,38■■■□□ 2,45
Pdzrn3Q69ZS0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
Pdzrn3Q69ZS0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30,37■■■□□ 2,45
Pdzrn3Q69ZS0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30,36■■■□□ 2,45
Pdzrn3Q69ZS0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30,35■■■□□ 2,45
Pdzrn3Q69ZS0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30,35■■■□□ 2,45
Pdzrn3Q69ZS0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30,34■■■□□ 2,45
Pdzrn3Q69ZS0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30,34■■■□□ 2,45
Pdzrn3Q69ZS0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30,31■■■□□ 2,44
Pdzrn3Q69ZS0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30,31■■■□□ 2,44
Pdzrn3Q69ZS0 Gm6206-201ENSMUST00000133472 2199 ntBASIC30,3■■■□□ 2,44
Pdzrn3Q69ZS0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30,3■■■□□ 2,44
Pdzrn3Q69ZS0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30,29■■■□□ 2,44
Pdzrn3Q69ZS0 Nkain2-201ENSMUST00000092602 558 ntBASIC30,29■■■□□ 2,44
Pdzrn3Q69ZS0 Zxda-201ENSMUST00000117281 2621 ntBASIC30,28■■■□□ 2,44
Pdzrn3Q69ZS0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30,28■■■□□ 2,44
Pdzrn3Q69ZS0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30,28■■■□□ 2,44
Pdzrn3Q69ZS0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Pdzrn3Q69ZS0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Pdzrn3Q69ZS0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30,26■■■□□ 2,43
Pdzrn3Q69ZS0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Pdzrn3Q69ZS0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Pdzrn3Q69ZS0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Pdzrn3Q69ZS0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30,24■■■□□ 2,43
Pdzrn3Q69ZS0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30,23■■■□□ 2,43
Pdzrn3Q69ZS0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30,23■■■□□ 2,43
Pdzrn3Q69ZS0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30,23■■■□□ 2,43
Pdzrn3Q69ZS0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30,22■■■□□ 2,43
Pdzrn3Q69ZS0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30,22■■■□□ 2,43
Pdzrn3Q69ZS0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30,22■■■□□ 2,43
Pdzrn3Q69ZS0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30,21■■■□□ 2,43
Pdzrn3Q69ZS0 Gm9905-201ENSMUST00000065740 1845 ntBASIC30,21■■■□□ 2,43
Pdzrn3Q69ZS0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Pdzrn3Q69ZS0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30,2■■■□□ 2,43
Pdzrn3Q69ZS0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Pdzrn3Q69ZS0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Pdzrn3Q69ZS0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Pdzrn3Q69ZS0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Pdzrn3Q69ZS0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30,19■■■□□ 2,42
Pdzrn3Q69ZS0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30,18■■■□□ 2,42
Pdzrn3Q69ZS0 Gm30346-201ENSMUST00000218641 1699 ntBASIC30,18■■■□□ 2,42
Pdzrn3Q69ZS0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30,18■■■□□ 2,42
Pdzrn3Q69ZS0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Retrieved 100 of 76,532 protein–RNA pairs in 35,1 ms