Protein–RNA interactions for Protein: Q60949

Tbc1d1, TBC1 domain family member 1, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbc1d1Q60949 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Tbc1d1Q60949 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Tbc1d1Q60949 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tbc1d1Q60949 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Tbc1d1Q60949 Gm7432-201ENSMUST00000210343 879 ntBASIC26.35■■□□□ 1.81
Tbc1d1Q60949 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tbc1d1Q60949 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Tbc1d1Q60949 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Tbc1d1Q60949 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Tbc1d1Q60949 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Tbc1d1Q60949 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tbc1d1Q60949 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tbc1d1Q60949 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.33■■□□□ 1.81
Tbc1d1Q60949 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tbc1d1Q60949 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Tbc1d1Q60949 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Tbc1d1Q60949 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.32■■□□□ 1.8
Tbc1d1Q60949 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.31■■□□□ 1.8
Tbc1d1Q60949 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.31■■□□□ 1.8
Tbc1d1Q60949 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tbc1d1Q60949 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tbc1d1Q60949 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.29■■□□□ 1.8
Tbc1d1Q60949 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tbc1d1Q60949 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tbc1d1Q60949 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tbc1d1Q60949 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tbc1d1Q60949 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tbc1d1Q60949 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Tbc1d1Q60949 Nkain2-201ENSMUST00000092602 558 ntBASIC26.24■■□□□ 1.79
Tbc1d1Q60949 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tbc1d1Q60949 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.23■■□□□ 1.79
Tbc1d1Q60949 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tbc1d1Q60949 Mir6538-201ENSMUST00000183713 110 ntBASIC26.23■■□□□ 1.79
Tbc1d1Q60949 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.22■■□□□ 1.79
Tbc1d1Q60949 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Tbc1d1Q60949 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.22■■□□□ 1.79
Tbc1d1Q60949 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tbc1d1Q60949 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.22■■□□□ 1.79
Tbc1d1Q60949 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tbc1d1Q60949 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.19■■□□□ 1.78
Tbc1d1Q60949 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.18■■□□□ 1.78
Tbc1d1Q60949 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tbc1d1Q60949 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tbc1d1Q60949 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Tbc1d1Q60949 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tbc1d1Q60949 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Tbc1d1Q60949 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Tbc1d1Q60949 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tbc1d1Q60949 Gm11175-201ENSMUST00000116172 543 ntBASIC26.15■■□□□ 1.78
Tbc1d1Q60949 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Tbc1d1Q60949 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tbc1d1Q60949 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Tbc1d1Q60949 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.14■■□□□ 1.78
Tbc1d1Q60949 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Tbc1d1Q60949 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Tbc1d1Q60949 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tbc1d1Q60949 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Tbc1d1Q60949 Gm11599-201ENSMUST00000118720 878 ntBASIC26.12■■□□□ 1.77
Tbc1d1Q60949 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Tbc1d1Q60949 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tbc1d1Q60949 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tbc1d1Q60949 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tbc1d1Q60949 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Tbc1d1Q60949 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.1■■□□□ 1.77
Tbc1d1Q60949 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Tbc1d1Q60949 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Tbc1d1Q60949 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.1■■□□□ 1.77
Tbc1d1Q60949 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Tbc1d1Q60949 Cap2-205ENSMUST00000225824 1634 ntBASIC26.09■■□□□ 1.77
Tbc1d1Q60949 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Tbc1d1Q60949 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Tbc1d1Q60949 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Tbc1d1Q60949 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.76
Tbc1d1Q60949 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tbc1d1Q60949 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Tbc1d1Q60949 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tbc1d1Q60949 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Tbc1d1Q60949 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Tbc1d1Q60949 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Tbc1d1Q60949 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Tbc1d1Q60949 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tbc1d1Q60949 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tbc1d1Q60949 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tbc1d1Q60949 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Tbc1d1Q60949 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Tbc1d1Q60949 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.01■■□□□ 1.75
Tbc1d1Q60949 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.01■■□□□ 1.75
Tbc1d1Q60949 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tbc1d1Q60949 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
Tbc1d1Q60949 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
Tbc1d1Q60949 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.98■■□□□ 1.75
Tbc1d1Q60949 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Tbc1d1Q60949 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Tbc1d1Q60949 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Tbc1d1Q60949 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Tbc1d1Q60949 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
Tbc1d1Q60949 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
Tbc1d1Q60949 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Tbc1d1Q60949 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Tbc1d1Q60949 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.93■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms