Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
Col5a2Q3U962 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Col5a2Q3U962 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Col5a2Q3U962 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Col5a2Q3U962 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.71■■■□□ 2.51
Col5a2Q3U962 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Col5a2Q3U962 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Col5a2Q3U962 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.69■■■□□ 2.5
Col5a2Q3U962 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Col5a2Q3U962 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Col5a2Q3U962 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Col5a2Q3U962 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.67■■■□□ 2.5
Col5a2Q3U962 Mir6538-201ENSMUST00000183713 110 ntBASIC30.66■■■□□ 2.5
Col5a2Q3U962 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.66■■■□□ 2.5
Col5a2Q3U962 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Col5a2Q3U962 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Col5a2Q3U962 Gm11175-201ENSMUST00000116172 543 ntBASIC30.64■■■□□ 2.5
Col5a2Q3U962 Gm11599-201ENSMUST00000118720 878 ntBASIC30.64■■■□□ 2.5
Col5a2Q3U962 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Col5a2Q3U962 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Col5a2Q3U962 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
Col5a2Q3U962 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Col5a2Q3U962 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Col5a2Q3U962 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.6■■■□□ 2.49
Col5a2Q3U962 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Col5a2Q3U962 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Col5a2Q3U962 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Col5a2Q3U962 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Col5a2Q3U962 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
Col5a2Q3U962 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Col5a2Q3U962 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
Col5a2Q3U962 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Col5a2Q3U962 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Col5a2Q3U962 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Col5a2Q3U962 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Col5a2Q3U962 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Col5a2Q3U962 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Col5a2Q3U962 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Col5a2Q3U962 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.5■■■□□ 2.47
Col5a2Q3U962 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
Col5a2Q3U962 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Col5a2Q3U962 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Col5a2Q3U962 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Col5a2Q3U962 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Col5a2Q3U962 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Col5a2Q3U962 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Col5a2Q3U962 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Col5a2Q3U962 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Col5a2Q3U962 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Col5a2Q3U962 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Col5a2Q3U962 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.42■■■□□ 2.46
Col5a2Q3U962 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.42■■■□□ 2.46
Col5a2Q3U962 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Col5a2Q3U962 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Col5a2Q3U962 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Col5a2Q3U962 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.4■■■□□ 2.46
Col5a2Q3U962 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Col5a2Q3U962 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Col5a2Q3U962 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Col5a2Q3U962 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Col5a2Q3U962 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.38■■■□□ 2.45
Col5a2Q3U962 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Col5a2Q3U962 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Col5a2Q3U962 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Col5a2Q3U962 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Col5a2Q3U962 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
Col5a2Q3U962 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30.34■■■□□ 2.45
Col5a2Q3U962 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Col5a2Q3U962 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Col5a2Q3U962 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Col5a2Q3U962 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.32■■■□□ 2.44
Col5a2Q3U962 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.31■■■□□ 2.44
Col5a2Q3U962 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
Col5a2Q3U962 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
Col5a2Q3U962 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.3■■■□□ 2.44
Col5a2Q3U962 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.3■■■□□ 2.44
Col5a2Q3U962 Cap2-205ENSMUST00000225824 1634 ntBASIC30.3■■■□□ 2.44
Col5a2Q3U962 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Col5a2Q3U962 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Col5a2Q3U962 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
Col5a2Q3U962 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Col5a2Q3U962 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Col5a2Q3U962 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Col5a2Q3U962 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Col5a2Q3U962 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Col5a2Q3U962 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.24■■■□□ 2.43
Col5a2Q3U962 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Col5a2Q3U962 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Col5a2Q3U962 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Col5a2Q3U962 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.22■■■□□ 2.43
Col5a2Q3U962 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.22■■■□□ 2.43
Col5a2Q3U962 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Col5a2Q3U962 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.19■■■□□ 2.42
Col5a2Q3U962 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.18■■■□□ 2.42
Col5a2Q3U962 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Col5a2Q3U962 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Col5a2Q3U962 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
Col5a2Q3U962 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.15■■■□□ 2.42
Col5a2Q3U962 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
Col5a2Q3U962 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.12■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms