Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.68■■□□□ 1.54
SgcgP82348 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.67■■□□□ 1.54
SgcgP82348 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SgcgP82348 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SgcgP82348 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SgcgP82348 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SgcgP82348 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SgcgP82348 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SgcgP82348 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SgcgP82348 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SgcgP82348 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
SgcgP82348 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SgcgP82348 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
SgcgP82348 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SgcgP82348 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SgcgP82348 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SgcgP82348 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SgcgP82348 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SgcgP82348 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SgcgP82348 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SgcgP82348 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SgcgP82348 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SgcgP82348 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.57■■□□□ 1.52
SgcgP82348 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SgcgP82348 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SgcgP82348 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
SgcgP82348 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SgcgP82348 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SgcgP82348 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
SgcgP82348 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SgcgP82348 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SgcgP82348 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SgcgP82348 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SgcgP82348 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SgcgP82348 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.53■■□□□ 1.52
SgcgP82348 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SgcgP82348 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SgcgP82348 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.51■■□□□ 1.51
SgcgP82348 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SgcgP82348 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.5■■□□□ 1.51
SgcgP82348 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SgcgP82348 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SgcgP82348 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SgcgP82348 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
SgcgP82348 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SgcgP82348 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SgcgP82348 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SgcgP82348 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SgcgP82348 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SgcgP82348 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SgcgP82348 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SgcgP82348 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SgcgP82348 Gm6821-201ENSMUST00000107540 542 ntBASIC24.43■■□□□ 1.5
SgcgP82348 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SgcgP82348 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.42■■□□□ 1.5
SgcgP82348 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SgcgP82348 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SgcgP82348 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SgcgP82348 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.4■■□□□ 1.5
SgcgP82348 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SgcgP82348 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SgcgP82348 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SgcgP82348 Gm8503-201ENSMUST00000118131 455 ntBASIC24.37■■□□□ 1.49
SgcgP82348 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SgcgP82348 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SgcgP82348 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.36■■□□□ 1.49
SgcgP82348 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SgcgP82348 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SgcgP82348 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SgcgP82348 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SgcgP82348 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SgcgP82348 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SgcgP82348 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.34■■□□□ 1.49
SgcgP82348 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SgcgP82348 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.33■■□□□ 1.48
SgcgP82348 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.32■■□□□ 1.48
SgcgP82348 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SgcgP82348 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SgcgP82348 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SgcgP82348 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SgcgP82348 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SgcgP82348 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SgcgP82348 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SgcgP82348 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SgcgP82348 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SgcgP82348 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SgcgP82348 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SgcgP82348 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.25■■□□□ 1.47
SgcgP82348 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
SgcgP82348 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.24■■□□□ 1.47
SgcgP82348 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SgcgP82348 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SgcgP82348 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
SgcgP82348 Nkain2-201ENSMUST00000092602 558 ntBASIC24.23■■□□□ 1.47
SgcgP82348 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SgcgP82348 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SgcgP82348 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.22■■□□□ 1.47
SgcgP82348 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
SgcgP82348 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SgcgP82348 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms