Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.84■□□□□ 0.45
TcraP01849 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TcraP01849 Mipep-204ENSMUST00000225043 1548 ntBASIC17.84■□□□□ 0.45
TcraP01849 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TcraP01849 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.84■□□□□ 0.45
TcraP01849 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TcraP01849 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TcraP01849 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TcraP01849 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TcraP01849 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TcraP01849 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TcraP01849 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TcraP01849 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TcraP01849 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TcraP01849 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.8■□□□□ 0.44
TcraP01849 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TcraP01849 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TcraP01849 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TcraP01849 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.78■□□□□ 0.44
TcraP01849 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TcraP01849 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TcraP01849 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TcraP01849 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TcraP01849 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TcraP01849 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TcraP01849 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TcraP01849 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TcraP01849 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TcraP01849 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TcraP01849 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.74■□□□□ 0.43
TcraP01849 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TcraP01849 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TcraP01849 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TcraP01849 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.72■□□□□ 0.43
TcraP01849 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TcraP01849 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TcraP01849 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TcraP01849 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TcraP01849 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TcraP01849 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TcraP01849 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TcraP01849 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TcraP01849 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TcraP01849 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TcraP01849 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.69■□□□□ 0.42
TcraP01849 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TcraP01849 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TcraP01849 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TcraP01849 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TcraP01849 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TcraP01849 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TcraP01849 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TcraP01849 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TcraP01849 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TcraP01849 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TcraP01849 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TcraP01849 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TcraP01849 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TcraP01849 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TcraP01849 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TcraP01849 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TcraP01849 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TcraP01849 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.63■□□□□ 0.41
TcraP01849 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TcraP01849 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TcraP01849 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TcraP01849 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TcraP01849 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TcraP01849 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TcraP01849 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TcraP01849 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TcraP01849 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TcraP01849 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TcraP01849 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TcraP01849 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TcraP01849 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TcraP01849 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TcraP01849 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TcraP01849 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.57■□□□□ 0.4
TcraP01849 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TcraP01849 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TcraP01849 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TcraP01849 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
TcraP01849 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TcraP01849 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TcraP01849 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TcraP01849 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TcraP01849 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TcraP01849 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TcraP01849 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TcraP01849 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TcraP01849 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TcraP01849 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.53■□□□□ 0.4
TcraP01849 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TcraP01849 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TcraP01849 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TcraP01849 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
TcraP01849 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TcraP01849 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TcraP01849 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms