Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cxcl13O55038 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cxcl13O55038 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cxcl13O55038 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cxcl13O55038 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cxcl13O55038 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cxcl13O55038 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cxcl13O55038 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cxcl13O55038 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cxcl13O55038 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cxcl13O55038 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cxcl13O55038 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cxcl13O55038 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cxcl13O55038 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.27■■□□□ 1
Cxcl13O55038 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cxcl13O55038 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cxcl13O55038 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cxcl13O55038 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
Cxcl13O55038 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Cxcl13O55038 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cxcl13O55038 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Cxcl13O55038 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.24■□□□□ 0.99
Cxcl13O55038 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cxcl13O55038 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cxcl13O55038 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cxcl13O55038 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cxcl13O55038 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cxcl13O55038 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.22■□□□□ 0.99
Cxcl13O55038 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cxcl13O55038 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cxcl13O55038 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcl13O55038 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcl13O55038 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcl13O55038 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cxcl13O55038 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cxcl13O55038 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cxcl13O55038 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cxcl13O55038 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cxcl13O55038 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.18■□□□□ 0.98
Cxcl13O55038 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cxcl13O55038 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cxcl13O55038 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cxcl13O55038 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cxcl13O55038 Gm6821-201ENSMUST00000107540 542 ntBASIC21.16■□□□□ 0.98
Cxcl13O55038 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cxcl13O55038 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cxcl13O55038 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cxcl13O55038 Gm8503-201ENSMUST00000118131 455 ntBASIC21.14■□□□□ 0.97
Cxcl13O55038 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cxcl13O55038 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cxcl13O55038 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cxcl13O55038 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.12■□□□□ 0.97
Cxcl13O55038 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcl13O55038 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcl13O55038 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcl13O55038 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cxcl13O55038 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cxcl13O55038 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.08■□□□□ 0.97
Cxcl13O55038 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cxcl13O55038 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.07■□□□□ 0.96
Cxcl13O55038 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.07■□□□□ 0.96
Cxcl13O55038 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcl13O55038 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcl13O55038 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcl13O55038 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcl13O55038 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcl13O55038 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.06■□□□□ 0.96
Cxcl13O55038 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.05■□□□□ 0.96
Cxcl13O55038 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl13O55038 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcl13O55038 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcl13O55038 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcl13O55038 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcl13O55038 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.01■□□□□ 0.95
Cxcl13O55038 Nkain2-201ENSMUST00000092602 558 ntBASIC21.01■□□□□ 0.95
Cxcl13O55038 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcl13O55038 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Cxcl13O55038 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cxcl13O55038 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cxcl13O55038 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cxcl13O55038 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cxcl13O55038 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cxcl13O55038 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Cxcl13O55038 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cxcl13O55038 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcl13O55038 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.97■□□□□ 0.95
Cxcl13O55038 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcl13O55038 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcl13O55038 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cxcl13O55038 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cxcl13O55038 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cxcl13O55038 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.93■□□□□ 0.94
Cxcl13O55038 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Cxcl13O55038 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl13O55038 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.92■□□□□ 0.94
Cxcl13O55038 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl13O55038 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl13O55038 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl13O55038 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Cxcl13O55038 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms