Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trdv2-1A0A0G2JGB9 Rab21-202ENSMUST00000218831 843 ntBASIC17.97■□□□□ 0.47
Trdv2-1A0A0G2JGB9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trdv2-1A0A0G2JGB9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trdv2-1A0A0G2JGB9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trdv2-1A0A0G2JGB9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.96■□□□□ 0.47
Trdv2-1A0A0G2JGB9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.94■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.91■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.9■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdv2-1A0A0G2JGB9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdv2-1A0A0G2JGB9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.84■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trdv2-1A0A0G2JGB9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.82■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdv2-1A0A0G2JGB9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.79■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.78■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Trdv2-1A0A0G2JGB9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.76■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv2-1A0A0G2JGB9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdv2-1A0A0G2JGB9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Mipep-204ENSMUST00000225043 1548 ntBASIC17.72■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trdv2-1A0A0G2JGB9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms