Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Trav6n-6A0A075B6B2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav6n-6A0A075B6B2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6n-6A0A075B6B2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6n-6A0A075B6B2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6n-6A0A075B6B2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6n-6A0A075B6B2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6n-6A0A075B6B2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-6A0A075B6B2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav6n-6A0A075B6B2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-6A0A075B6B2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-6A0A075B6B2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-6A0A075B6B2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav6n-6A0A075B6B2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-6A0A075B6B2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6n-6A0A075B6B2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6n-6A0A075B6B2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav6n-6A0A075B6B2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6n-6A0A075B6B2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6n-6A0A075B6B2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.08■□□□□ 0.48
Trav6n-6A0A075B6B2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trav6n-6A0A075B6B2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6n-6A0A075B6B2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav6n-6A0A075B6B2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6n-6A0A075B6B2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6n-6A0A075B6B2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6n-6A0A075B6B2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6n-6A0A075B6B2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6n-6A0A075B6B2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.03■□□□□ 0.48
Trav6n-6A0A075B6B2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6n-6A0A075B6B2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6n-6A0A075B6B2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trav6n-6A0A075B6B2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6n-6A0A075B6B2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav6n-6A0A075B6B2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6n-6A0A075B6B2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6n-6A0A075B6B2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6n-6A0A075B6B2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-6A0A075B6B2 Peli2-204ENSMUST00000226513 1320 ntBASIC18■□□□□ 0.47
Trav6n-6A0A075B6B2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-6A0A075B6B2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18■□□□□ 0.47
Trav6n-6A0A075B6B2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-6A0A075B6B2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6n-6A0A075B6B2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-6A0A075B6B2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-6A0A075B6B2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-6A0A075B6B2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-6A0A075B6B2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trav6n-6A0A075B6B2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-6A0A075B6B2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6n-6A0A075B6B2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6n-6A0A075B6B2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6n-6A0A075B6B2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6n-6A0A075B6B2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav6n-6A0A075B6B2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6n-6A0A075B6B2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav6n-6A0A075B6B2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6n-6A0A075B6B2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Trav6n-6A0A075B6B2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Trav6n-6A0A075B6B2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6n-6A0A075B6B2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6n-6A0A075B6B2 Gm16148-201ENSMUST00000119653 893 ntBASIC17.94■□□□□ 0.46
Trav6n-6A0A075B6B2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.93■□□□□ 0.46
Trav6n-6A0A075B6B2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6n-6A0A075B6B2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav6n-6A0A075B6B2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6n-6A0A075B6B2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav6n-6A0A075B6B2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6n-6A0A075B6B2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6n-6A0A075B6B2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6n-6A0A075B6B2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trav6n-6A0A075B6B2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-6A0A075B6B2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-6A0A075B6B2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav6n-6A0A075B6B2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6n-6A0A075B6B2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav6n-6A0A075B6B2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6n-6A0A075B6B2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6n-6A0A075B6B2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav6n-6A0A075B6B2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6n-6A0A075B6B2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav6n-6A0A075B6B2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6n-6A0A075B6B2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6n-6A0A075B6B2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6n-6A0A075B6B2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6n-6A0A075B6B2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6n-6A0A075B6B2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6n-6A0A075B6B2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6n-6A0A075B6B2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6n-6A0A075B6B2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6n-6A0A075B6B2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6n-6A0A075B6B2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6n-6A0A075B6B2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6n-6A0A075B6B2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trav6n-6A0A075B6B2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Trav6n-6A0A075B6B2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav6n-6A0A075B6B2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6n-6A0A075B6B2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6n-6A0A075B6B2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6n-6A0A075B6B2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms