Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4n-4A0A075B615 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4n-4A0A075B615 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4n-4A0A075B615 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4n-4A0A075B615 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4n-4A0A075B615 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav4n-4A0A075B615 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav4n-4A0A075B615 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav4n-4A0A075B615 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav4n-4A0A075B615 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4n-4A0A075B615 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav4n-4A0A075B615 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4n-4A0A075B615 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4n-4A0A075B615 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4n-4A0A075B615 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav4n-4A0A075B615 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4n-4A0A075B615 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Trav4n-4A0A075B615 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4n-4A0A075B615 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav4n-4A0A075B615 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav4n-4A0A075B615 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4n-4A0A075B615 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav4n-4A0A075B615 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav4n-4A0A075B615 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Trav4n-4A0A075B615 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav4n-4A0A075B615 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav4n-4A0A075B615 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav4n-4A0A075B615 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav4n-4A0A075B615 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav4n-4A0A075B615 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav4n-4A0A075B615 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Trav4n-4A0A075B615 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav4n-4A0A075B615 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav4n-4A0A075B615 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav4n-4A0A075B615 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav4n-4A0A075B615 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4n-4A0A075B615 Mipep-204ENSMUST00000225043 1548 ntBASIC17.06■□□□□ 0.32
Trav4n-4A0A075B615 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav4n-4A0A075B615 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav4n-4A0A075B615 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav4n-4A0A075B615 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav4n-4A0A075B615 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4n-4A0A075B615 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav4n-4A0A075B615 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav4n-4A0A075B615 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav4n-4A0A075B615 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav4n-4A0A075B615 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav4n-4A0A075B615 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav4n-4A0A075B615 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav4n-4A0A075B615 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav4n-4A0A075B615 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.99■□□□□ 0.31
Trav4n-4A0A075B615 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav4n-4A0A075B615 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav4n-4A0A075B615 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav4n-4A0A075B615 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav4n-4A0A075B615 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav4n-4A0A075B615 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav4n-4A0A075B615 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav4n-4A0A075B615 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav4n-4A0A075B615 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav4n-4A0A075B615 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
Trav4n-4A0A075B615 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4n-4A0A075B615 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4n-4A0A075B615 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav4n-4A0A075B615 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4n-4A0A075B615 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4n-4A0A075B615 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4n-4A0A075B615 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4n-4A0A075B615 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4n-4A0A075B615 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav4n-4A0A075B615 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4n-4A0A075B615 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.92■□□□□ 0.3
Trav4n-4A0A075B615 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trav4n-4A0A075B615 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav4n-4A0A075B615 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav4n-4A0A075B615 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4n-4A0A075B615 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4n-4A0A075B615 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4n-4A0A075B615 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav4n-4A0A075B615 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4n-4A0A075B615 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4n-4A0A075B615 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4n-4A0A075B615 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4n-4A0A075B615 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4n-4A0A075B615 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4n-4A0A075B615 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4n-4A0A075B615 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4n-4A0A075B615 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav4n-4A0A075B615 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4n-4A0A075B615 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4n-4A0A075B615 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4n-4A0A075B615 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Trav4n-4A0A075B615 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav4n-4A0A075B615 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4n-4A0A075B615 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4n-4A0A075B615 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4n-4A0A075B615 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4n-4A0A075B615 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4n-4A0A075B615 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav4n-4A0A075B615 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms