Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 AC010141.2-201ENST00000452426 721 ntBASIC21.29■■□□□ 1
RAI2Q9Y5P3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.29■■□□□ 1
RAI2Q9Y5P3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
RAI2Q9Y5P3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.29■■□□□ 1
RAI2Q9Y5P3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RAI2Q9Y5P3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RAI2Q9Y5P3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAI2Q9Y5P3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.28■■□□□ 1
RAI2Q9Y5P3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.28■■□□□ 1
RAI2Q9Y5P3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAI2Q9Y5P3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAI2Q9Y5P3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAI2Q9Y5P3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RAI2Q9Y5P3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.28■■□□□ 1
RAI2Q9Y5P3 AC080038.1-201ENST00000611274 1154 ntBASIC21.28■■□□□ 1
RAI2Q9Y5P3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RAI2Q9Y5P3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RAI2Q9Y5P3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAI2Q9Y5P3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.28■■□□□ 1
RAI2Q9Y5P3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.28■■□□□ 1
RAI2Q9Y5P3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.27■■□□□ 1
RAI2Q9Y5P3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.27■■□□□ 1
RAI2Q9Y5P3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.27■■□□□ 1
RAI2Q9Y5P3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.27■■□□□ 1
RAI2Q9Y5P3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.27■■□□□ 1
RAI2Q9Y5P3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 TMEM191A-211ENST00000637163 1067 ntBASIC21.27■■□□□ 1
RAI2Q9Y5P3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.27■■□□□ 1
RAI2Q9Y5P3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI2Q9Y5P3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAI2Q9Y5P3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RAI2Q9Y5P3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 AC008175.2-201ENST00000612840 297 ntBASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RAI2Q9Y5P3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 AC061975.6-201ENST00000579045 1553 ntBASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 Z98882.1-201ENST00000622160 2253 ntBASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI2Q9Y5P3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 POU5F1P4-201ENST00000413175 1085 ntBASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.23■□□□□ 0.99
RAI2Q9Y5P3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms