Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 AL355802.2-201ENST00000402069 882 ntBASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 AC079089.2-201ENST00000531211 1277 ntBASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA6Q9Y5G7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
PCDHGA6Q9Y5G7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGA6Q9Y5G7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 SLC25A24-204ENST00000569674 2357 ntBASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 DUX4L16-201ENST00000555130 1264 ntBASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGA6Q9Y5G7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 AP001160.3-201ENST00000601484 763 ntBASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 UBE2DNL-204ENST00000602536 740 ntBASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 AL121832.2-201ENST00000610979 668 ntBASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGA6Q9Y5G7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 FAM99A-202ENST00000538190 1989 ntBASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 AC142086.2-201ENST00000569753 217 ntBASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA6Q9Y5G7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 LINC01960-201ENST00000563759 1884 ntBASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 AC010542.4-201ENST00000563151 1910 ntBASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 AC007322.1-201ENST00000426983 750 ntBASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 MYCNOS-205ENST00000641950 531 ntBASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA6Q9Y5G7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms