Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00588Q9Y4M8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00588Q9Y4M8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 AC007322.4-201ENST00000509611 723 ntBASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00588Q9Y4M8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 AC068338.2-201ENST00000563278 1430 ntBASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 RBM17P2-201ENST00000616397 1405 ntBASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 CYP2T1P-201ENST00000432607 1285 ntBASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 TSPY6P-201ENST00000448518 926 ntBASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 AF201337.1-201ENST00000520239 748 ntBASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 AC105036.2-201ENST00000569468 176 ntBASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 ECEL1P1-201ENST00000373592 1742 ntBASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00588Q9Y4M8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 SLC29A4P1-201ENST00000398760 971 ntBASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 AC133552.2-202ENST00000575694 574 ntBASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 C11orf96-202ENST00000528572 1834 ntBASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00588Q9Y4M8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 AC008694.1-202ENST00000636953 945 ntBASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00588Q9Y4M8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00588Q9Y4M8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms