Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 AC007322.4-201ENST00000509611 723 ntBASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 AC005181.1-201ENST00000604782 1256 ntBASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 AC243732.1-201ENST00000612648 864 ntBASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 RBM17P2-201ENST00000616397 1405 ntBASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN1Q9UMX0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 AL050303.2-201ENST00000619798 666 ntBASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBQLN1Q9UMX0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 NCF1B-203ENST00000435988 1254 ntBASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.6■■□□□ 1.21
UBQLN1Q9UMX0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
UBQLN1Q9UMX0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBQLN1Q9UMX0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBQLN1Q9UMX0 HLA-L-209ENST00000420110 1011 ntBASIC22.59■■□□□ 1.21
UBQLN1Q9UMX0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.59■■□□□ 1.21
UBQLN1Q9UMX0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBQLN1Q9UMX0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.59■■□□□ 1.21
UBQLN1Q9UMX0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBQLN1Q9UMX0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.58■■□□□ 1.21
UBQLN1Q9UMX0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.58■■□□□ 1.21
UBQLN1Q9UMX0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
UBQLN1Q9UMX0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBQLN1Q9UMX0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.58■■□□□ 1.21
UBQLN1Q9UMX0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UBQLN1Q9UMX0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
UBQLN1Q9UMX0 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.58■■□□□ 1.21
UBQLN1Q9UMX0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.21
UBQLN1Q9UMX0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
UBQLN1Q9UMX0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
UBQLN1Q9UMX0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
UBQLN1Q9UMX0 AC068338.2-201ENST00000563278 1430 ntBASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 EP400NL-214ENST00000641289 2402 ntBASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN1Q9UMX0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 GPX1P1-201ENST00000388829 606 ntBASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 AC245052.3-201ENST00000450182 901 ntBASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 AL121832.2-201ENST00000610979 668 ntBASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms