Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TMCC3Q9ULS5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMCC3Q9ULS5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
TMCC3Q9ULS5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMCC3Q9ULS5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 LINC01006-201ENST00000333319 2292 ntBASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMCC3Q9ULS5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.4■□□□□ 0.7
TMCC3Q9ULS5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.39■□□□□ 0.7
TMCC3Q9ULS5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.39■□□□□ 0.7
TMCC3Q9ULS5 FEM1AP1-201ENST00000431297 1995 ntBASIC19.39■□□□□ 0.7
TMCC3Q9ULS5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 AP005435.1-201ENST00000529293 1178 ntBASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMCC3Q9ULS5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 AL138724.1-201ENST00000606771 1088 ntBASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 AC092667.1-201ENST00000434301 2586 ntBASIC19.38■□□□□ 0.69
TMCC3Q9ULS5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMCC3Q9ULS5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMCC3Q9ULS5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms