Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 AC233992.3-201ENST00000607491 485 ntBASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 AL136967.2-201ENST00000623968 743 ntBASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 AC003102.1-202ENST00000563394 1796 ntBASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
VTI1BQ9UEU0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 MIR939-201ENST00000401314 82 ntBASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 SLC47A1P1-202ENST00000449666 945 ntBASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 AP001330.3-201ENST00000520123 633 ntBASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTI1BQ9UEU0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 AC142381.2-201ENST00000566120 298 ntBASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
VTI1BQ9UEU0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 AC027682.1-201ENST00000562846 899 ntBASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 AF213884.3-201ENST00000563833 479 ntBASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 AC010525.1-201ENST00000585559 441 ntBASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 AC008764.7-201ENST00000593779 1081 ntBASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 AP004607.7-201ENST00000527152 1677 ntBASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTI1BQ9UEU0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 RASA4CP-201ENST00000424092 1398 ntBASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 AC091305.1-201ENST00000479476 895 ntBASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTI1BQ9UEU0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.58■□□□□ 0.89
VTI1BQ9UEU0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.58■□□□□ 0.88
VTI1BQ9UEU0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
VTI1BQ9UEU0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
VTI1BQ9UEU0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms