Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AL109923.1-201ENST00000618799 583 ntBASIC19.82■□□□□ 0.76
CTSFQ9UBX1 AC013268.1-206ENST00000638368 961 ntBASIC19.82■□□□□ 0.76
CTSFQ9UBX1 AC112229.1-201ENST00000639295 961 ntBASIC19.82■□□□□ 0.76
CTSFQ9UBX1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 KRT16P2-201ENST00000414673 1423 ntBASIC19.82■□□□□ 0.76
CTSFQ9UBX1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.81■□□□□ 0.76
CTSFQ9UBX1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.8■□□□□ 0.76
CTSFQ9UBX1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSFQ9UBX1 GPX1P1-201ENST00000388829 606 ntBASIC19.8■□□□□ 0.76
CTSFQ9UBX1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.8■□□□□ 0.76
CTSFQ9UBX1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.8■□□□□ 0.76
CTSFQ9UBX1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTSFQ9UBX1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.8■□□□□ 0.76
CTSFQ9UBX1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CTSFQ9UBX1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSFQ9UBX1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 AL355802.2-201ENST00000402069 882 ntBASIC19.79■□□□□ 0.76
CTSFQ9UBX1 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.79■□□□□ 0.76
CTSFQ9UBX1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 AL121832.2-201ENST00000610979 668 ntBASIC19.78■□□□□ 0.76
CTSFQ9UBX1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 ECEL1P1-201ENST00000373592 1742 ntBASIC19.78■□□□□ 0.76
CTSFQ9UBX1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 C11orf96-202ENST00000528572 1834 ntBASIC19.78■□□□□ 0.76
CTSFQ9UBX1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSFQ9UBX1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 CYP2T1P-201ENST00000432607 1285 ntBASIC19.77■□□□□ 0.76
CTSFQ9UBX1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 AC083906.2-201ENST00000511578 360 ntBASIC19.77■□□□□ 0.76
CTSFQ9UBX1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.77■□□□□ 0.76
CTSFQ9UBX1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTSFQ9UBX1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.77■□□□□ 0.75
CTSFQ9UBX1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms