Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TFCP2L1Q9NZI6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
TFCP2L1Q9NZI6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.91■■□□□ 1.9
TFCP2L1Q9NZI6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
TFCP2L1Q9NZI6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TFCP2L1Q9NZI6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TFCP2L1Q9NZI6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TFCP2L1Q9NZI6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
TFCP2L1Q9NZI6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TFCP2L1Q9NZI6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TFCP2L1Q9NZI6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
TFCP2L1Q9NZI6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.9■■□□□ 1.9
TFCP2L1Q9NZI6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.9■■□□□ 1.9
TFCP2L1Q9NZI6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.9■■□□□ 1.9
TFCP2L1Q9NZI6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TFCP2L1Q9NZI6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TFCP2L1Q9NZI6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
TFCP2L1Q9NZI6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TFCP2L1Q9NZI6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TFCP2L1Q9NZI6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
TFCP2L1Q9NZI6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
TFCP2L1Q9NZI6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
TFCP2L1Q9NZI6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.89■■□□□ 1.89
TFCP2L1Q9NZI6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.89■■□□□ 1.89
TFCP2L1Q9NZI6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
TFCP2L1Q9NZI6 AC061975.6-201ENST00000579045 1553 ntBASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 AC069544.1-201ENST00000609399 999 ntBASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TFCP2L1Q9NZI6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.87■■□□□ 1.89
TFCP2L1Q9NZI6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TFCP2L1Q9NZI6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
TFCP2L1Q9NZI6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.86■■□□□ 1.89
TFCP2L1Q9NZI6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.86■■□□□ 1.89
TFCP2L1Q9NZI6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
TFCP2L1Q9NZI6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TFCP2L1Q9NZI6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TFCP2L1Q9NZI6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TFCP2L1Q9NZI6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 TSPY7P-201ENST00000431358 1114 ntBASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 SOX15-203ENST00000570788 1093 ntBASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 AL589743.5-201ENST00000616611 1050 ntBASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 AC100791.3-201ENST00000617619 330 ntBASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 KRT17P2-201ENST00000300992 1314 ntBASIC26.85■■□□□ 1.89
TFCP2L1Q9NZI6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 FAM21FP-204ENST00000608637 956 ntBASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 AC133561.5-201ENST00000635547 218 ntBASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TFCP2L1Q9NZI6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 AC233702.5-201ENST00000584107 538 ntBASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
TFCP2L1Q9NZI6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms