Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TRPM3Q9HCF6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
TRPM3Q9HCF6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TRPM3Q9HCF6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRPM3Q9HCF6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRPM3Q9HCF6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRPM3Q9HCF6 RPPH1-201ENST00000516869 333 ntBASIC28.64■■■□□ 2.18
TRPM3Q9HCF6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC28.64■■■□□ 2.18
TRPM3Q9HCF6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC28.64■■■□□ 2.18
TRPM3Q9HCF6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRPM3Q9HCF6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.17
TRPM3Q9HCF6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 SLC29A4P2-201ENST00000504749 1089 ntBASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 C1QBPP2-201ENST00000528754 825 ntBASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 FAM197Y4-202ENST00000622692 608 ntBASIC28.63■■■□□ 2.17
TRPM3Q9HCF6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
TRPM3Q9HCF6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC28.62■■■□□ 2.17
TRPM3Q9HCF6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TRPM3Q9HCF6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TRPM3Q9HCF6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
TRPM3Q9HCF6 AC003102.1-202ENST00000563394 1796 ntBASIC28.62■■■□□ 2.17
TRPM3Q9HCF6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TRPM3Q9HCF6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TRPM3Q9HCF6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
TRPM3Q9HCF6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TRPM3Q9HCF6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
TRPM3Q9HCF6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC28.61■■■□□ 2.17
TRPM3Q9HCF6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TRPM3Q9HCF6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC28.61■■■□□ 2.17
TRPM3Q9HCF6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TRPM3Q9HCF6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TRPM3Q9HCF6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRPM3Q9HCF6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRPM3Q9HCF6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRPM3Q9HCF6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TRPM3Q9HCF6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC28.6■■■□□ 2.17
TRPM3Q9HCF6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC28.6■■■□□ 2.17
TRPM3Q9HCF6 AC073912.3-201ENST00000624414 853 ntBASIC28.6■■■□□ 2.17
TRPM3Q9HCF6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRPM3Q9HCF6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
TRPM3Q9HCF6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TRPM3Q9HCF6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC28.59■■■□□ 2.17
TRPM3Q9HCF6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TRPM3Q9HCF6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TRPM3Q9HCF6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 AC092368.3-202ENST00000574180 1591 ntBASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
TRPM3Q9HCF6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
TRPM3Q9HCF6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC28.56■■■□□ 2.16
TRPM3Q9HCF6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRPM3Q9HCF6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRPM3Q9HCF6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRPM3Q9HCF6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC28.56■■■□□ 2.16
TRPM3Q9HCF6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC28.56■■■□□ 2.16
TRPM3Q9HCF6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRPM3Q9HCF6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRPM3Q9HCF6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
TRPM3Q9HCF6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms