Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VIPAS39Q9H9C1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.56■■□□□ 1.04
VIPAS39Q9H9C1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 AC116562.4-201ENST00000641316 2276 ntBASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 AL499627.2-201ENST00000606283 725 ntBASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 AC129492.7-201ENST00000622992 756 ntBASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.55■■□□□ 1.04
VIPAS39Q9H9C1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.54■■□□□ 1.04
VIPAS39Q9H9C1 AC003102.1-202ENST00000563394 1796 ntBASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VIPAS39Q9H9C1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 AC121338.2-201ENST00000622535 1744 ntBASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 MIR7108-201ENST00000614319 87 ntBASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 MIR6722-201ENST00000617286 78 ntBASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
VIPAS39Q9H9C1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms