Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MAD1L1-209ENST00000438959 839 ntTSL 316.37■□□□□ 0.213e-7■■■■□ 26.2
XRN2Q9H0D6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.4■□□□□ 0.384e-8■■■■□ 26.2
XRN2Q9H0D6 MIDN-204ENST00000590136 536 ntTSL 218.1■□□□□ 0.494e-23■■■■□ 26.2
XRN2Q9H0D6 SH3BP2-220ENST00000511663 966 ntTSL 523.37■■□□□ 1.332e-7■■■■□ 26.2
XRN2Q9H0D6 SH3BP2-218ENST00000511185 1071 ntTSL 222.11■■□□□ 1.132e-7■■■■□ 26.2
XRN2Q9H0D6 SH3BP2-222ENST00000512014 688 ntTSL 315.12■□□□□ 0.012e-7■■■■□ 26.2
XRN2Q9H0D6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.02■■□□□ 1.62e-6■■■■□ 26.1
XRN2Q9H0D6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.46■■□□□ 1.352e-6■■■■□ 26.1
XRN2Q9H0D6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.71■■□□□ 1.232e-6■■■■□ 26.1
XRN2Q9H0D6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.172e-6■■■■□ 26.1
XRN2Q9H0D6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.66■□□□□ 0.742e-6■■■■□ 26.1
XRN2Q9H0D6 ARRB2-219ENST00000576235 991 ntTSL 519.22■□□□□ 0.672e-6■■■■□ 26.1
XRN2Q9H0D6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.79■□□□□ 0.442e-6■■■■□ 26.1
XRN2Q9H0D6 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC15.76■□□□□ 0.112e-6■■■■□ 26.1
XRN2Q9H0D6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.253e-6■■■■□ 26.1
XRN2Q9H0D6 ZNF444-202ENST00000586123 574 ntTSL 428.85■■■□□ 2.215e-9■■■■□ 26.1
XRN2Q9H0D6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.85■■■□□ 2.058e-8■■■■□ 26.1
XRN2Q9H0D6 ZNF444-205ENST00000587467 646 ntTSL 227.07■■□□□ 1.925e-9■■■■□ 26.1
XRN2Q9H0D6 ZNF444-208ENST00000588358 642 ntTSL 227.06■■□□□ 1.925e-9■■■■□ 26.1
XRN2Q9H0D6 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 323.49■■□□□ 1.353e-6■■■■□ 26.1
XRN2Q9H0D6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.213e-6■■■■□ 26.1
XRN2Q9H0D6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.194e-6■■■■□ 26.1
XRN2Q9H0D6 AC012676.1-201ENST00000574705 1949 ntBASIC22.04■■□□□ 1.122e-8■■■■□ 26.1
XRN2Q9H0D6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.4■■□□□ 1.023e-6■■■■□ 26.1
XRN2Q9H0D6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.28■□□□□ 0.688e-7■■■■□ 26.1
XRN2Q9H0D6 PRR5-ARHGAP8-204ENST00000515632 1590 ntTSL 216.68■□□□□ 0.267e-6■■■■□ 26.1
XRN2Q9H0D6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.178e-7■■■■□ 26.1
XRN2Q9H0D6 PRR5-ARHGAP8-203ENST00000495250 1271 ntTSL 215.68■□□□□ 0.17e-6■■■■□ 26.1
XRN2Q9H0D6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.52□□□□□ -0.095e-7■■■■□ 26.1
XRN2Q9H0D6 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.72□□□□□ -0.215e-7■■■■□ 26.1
XRN2Q9H0D6 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.258e-7■■■■□ 26.1
XRN2Q9H0D6 XYLT2-204ENST00000509778 145 ntTSL 312.42□□□□□ -0.428e-7■■■■□ 26.1
XRN2Q9H0D6 XYLT2-202ENST00000376550 3267 ntTSL 1 (best)12.08□□□□□ -0.478e-7■■■■□ 26.1
XRN2Q9H0D6 TRIP12-207ENST00000428959 584 ntTSL 310.35□□□□□ -0.751e-6■■■■□ 26.1
XRN2Q9H0D6 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.391e-13■■■■□ 26
XRN2Q9H0D6 COL18A1-205ENST00000423214 839 ntTSL 519.67■□□□□ 0.746e-6■■■■□ 26
XRN2Q9H0D6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.53□□□□□ -0.083e-6■■■■□ 26
XRN2Q9H0D6 CXXC5-209ENST00000507139 472 ntTSL 426.32■■□□□ 1.86e-7■■■■□ 26
XRN2Q9H0D6 CXXC5-206ENST00000504844 777 ntTSL 225.43■■□□□ 1.666e-7■■■■□ 26
XRN2Q9H0D6 CXXC5-203ENST00000502336 581 ntTSL 423.84■■□□□ 1.416e-7■■■■□ 26
XRN2Q9H0D6 CXXC5-202ENST00000502295 503 ntTSL 419.68■□□□□ 0.746e-7■■■■□ 26
XRN2Q9H0D6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.636e-7■■■■□ 26
XRN2Q9H0D6 CXXC5-216ENST00000520967 878 ntTSL 318.77■□□□□ 0.66e-7■■■■□ 26
XRN2Q9H0D6 KLHL17-202ENST00000463212 955 ntTSL 1 (best)18.71■□□□□ 0.596e-7■■■■□ 26
XRN2Q9H0D6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.566e-7■■■■□ 26
XRN2Q9H0D6 CXXC5-207ENST00000504944 568 ntTSL 316.84■□□□□ 0.296e-7■■■■□ 26
XRN2Q9H0D6 SUPT5H-204ENST00000432763 3710 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.536e-7■■■■□ 26
XRN2Q9H0D6 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.586e-7■■■■□ 26
XRN2Q9H0D6 SUPT5H-215ENST00000599117 3902 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.616e-7■■■■□ 26
XRN2Q9H0D6 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.626e-7■■■■□ 26
XRN2Q9H0D6 SUPT5H-213ENST00000598725 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.736e-7■■■■□ 26
XRN2Q9H0D6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.32e-11■■■■□ 26
XRN2Q9H0D6 STK25-210ENST00000426941 575 ntTSL 227.19■■□□□ 1.942e-7■■■■□ 26
XRN2Q9H0D6 STK25-219ENST00000452891 575 ntTSL 427.19■■□□□ 1.942e-7■■■■□ 26
XRN2Q9H0D6 STK25-207ENST00000420551 395 ntTSL 524.58■■□□□ 1.532e-7■■■■□ 26
XRN2Q9H0D6 STK25-227ENST00000483603 572 ntTSL 524.18■■□□□ 1.462e-7■■■■□ 26
XRN2Q9H0D6 STK25-214ENST00000436917 499 ntTSL 424.18■■□□□ 1.462e-7■■■■□ 26
XRN2Q9H0D6 STK25-217ENST00000442307 923 ntTSL 223.89■■□□□ 1.412e-7■■■■□ 26
XRN2Q9H0D6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.7■■□□□ 1.222e-7■■■■□ 26
XRN2Q9H0D6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.21■■□□□ 1.152e-7■■■■□ 26
XRN2Q9H0D6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.59■■□□□ 1.052e-7■■■■□ 26
XRN2Q9H0D6 STK25-211ENST00000429279 580 ntTSL 421.07■□□□□ 0.962e-7■■■■□ 26
XRN2Q9H0D6 STK25-232ENST00000495372 561 ntTSL 220.46■□□□□ 0.872e-7■■■■□ 26
XRN2Q9H0D6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.562e-7■■■■□ 26
XRN2Q9H0D6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.412e-7■■■■□ 26
XRN2Q9H0D6 STK25-216ENST00000440109 935 ntTSL 317.23■□□□□ 0.352e-7■■■■□ 26
XRN2Q9H0D6 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.03■□□□□ -02e-7■■■■□ 26
XRN2Q9H0D6 STK25-220ENST00000461760 644 ntTSL 314.12□□□□□ -0.152e-7■■■■□ 26
XRN2Q9H0D6 STK25-206ENST00000413760 801 ntTSL 312□□□□□ -0.492e-7■■■■□ 26
XRN2Q9H0D6 SRPK2-212ENST00000482897 715 ntTSL 525.23■■□□□ 1.631e-8■■■■□ 26
XRN2Q9H0D6 SRPK2-211ENST00000482862 329 ntTSL 524.96■■□□□ 1.591e-8■■■■□ 26
XRN2Q9H0D6 SRPK2-206ENST00000465112 568 ntTSL 317.1■□□□□ 0.331e-8■■■■□ 26
XRN2Q9H0D6 SRPK2-203ENST00000460391 666 ntTSL 216.4■□□□□ 0.221e-8■■■■□ 26
XRN2Q9H0D6 SRPK2-204ENST00000462282 505 ntTSL 314.5□□□□□ -0.091e-8■■■■□ 26
XRN2Q9H0D6 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.851e-8■■■■□ 26
XRN2Q9H0D6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.251e-6■■■■□ 26
XRN2Q9H0D6 AMPD2-213ENST00000524975 678 ntTSL 322.26■■□□□ 1.151e-6■■■■□ 26
XRN2Q9H0D6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.937e-24■■■■□ 26
XRN2Q9H0D6 MARS-211ENST00000548202 796 ntTSL 219.32■□□□□ 0.681e-6■■■■□ 26
XRN2Q9H0D6 RALGPS2-209ENST00000495034 1970 ntTSL 218.35■□□□□ 0.537e-24■■■■□ 26
XRN2Q9H0D6 AMPD2-215ENST00000526301 2354 ntTSL 1 (best)15.35■□□□□ 0.051e-6■■■■□ 26
XRN2Q9H0D6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 07e-24■■■■□ 26
XRN2Q9H0D6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.91□□□□□ -0.021e-6■■■■□ 26
XRN2Q9H0D6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.061e-6■■■■□ 26
XRN2Q9H0D6 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12.31□□□□□ -0.447e-24■■■■□ 26
XRN2Q9H0D6 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC12.26□□□□□ -0.451e-6■■■■□ 26
XRN2Q9H0D6 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC11.65□□□□□ -0.541e-6■■■■□ 26
XRN2Q9H0D6 AMPD2-205ENST00000393688 3217 ntTSL 1 (best) BASIC11.41□□□□□ -0.581e-6■■■■□ 26
XRN2Q9H0D6 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.611e-6■■■■□ 26
XRN2Q9H0D6 AMPD2-204ENST00000369840 3130 ntAPPRIS ALT2 TSL 510.78□□□□□ -0.681e-6■■■■□ 26
XRN2Q9H0D6 RALGPS2-201ENST00000324778 906 ntTSL 56.45□□□□□ -1.387e-24■■■■□ 26
XRN2Q9H0D6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC34.35■■■■□ 3.094e-7■■■■□ 25.9
XRN2Q9H0D6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.854e-7■■■■□ 25.9
XRN2Q9H0D6 STK25-215ENST00000439101 779 ntTSL 530.79■■■□□ 2.522e-7■■■■□ 25.9
XRN2Q9H0D6 STK25-209ENST00000424537 781 ntTSL 230.48■■■□□ 2.472e-7■■■■□ 25.9
XRN2Q9H0D6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.272e-7■■■■□ 25.9
XRN2Q9H0D6 STK25-213ENST00000436402 600 ntTSL 524.19■■□□□ 1.462e-7■■■■□ 25.9
XRN2Q9H0D6 TF-211ENST00000485977 580 ntTSL 321.75■■□□□ 1.073e-7■■■■□ 25.9
XRN2Q9H0D6 ARID4B-204ENST00000418304 1759 ntTSL 519.1■□□□□ 0.655e-7■■■■□ 25.9
XRN2Q9H0D6 ARID4B-207ENST00000462969 273 ntTSL 217.85■□□□□ 0.455e-7■■■■□ 25.9
Retrieved 100 of 21,068 protein–RNA pairs in 126.4 ms