Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.31■■□□□ 1
LRFN3Q9BTN0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRFN3Q9BTN0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRFN3Q9BTN0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
LRFN3Q9BTN0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRFN3Q9BTN0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LRFN3Q9BTN0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
LRFN3Q9BTN0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.3■■□□□ 1
LRFN3Q9BTN0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRFN3Q9BTN0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRFN3Q9BTN0 KRASP1-201ENST00000407852 552 ntBASIC21.3■■□□□ 1
LRFN3Q9BTN0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.3■■□□□ 1
LRFN3Q9BTN0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRFN3Q9BTN0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.3■■□□□ 1
LRFN3Q9BTN0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRFN3Q9BTN0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.3■■□□□ 1
LRFN3Q9BTN0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.3■■□□□ 1
LRFN3Q9BTN0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.3■■□□□ 1
LRFN3Q9BTN0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRFN3Q9BTN0 AP004607.7-201ENST00000527152 1677 ntBASIC21.3■■□□□ 1
LRFN3Q9BTN0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 AC073508.3-201ENST00000619697 1419 ntBASIC21.29■■□□□ 1
LRFN3Q9BTN0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRFN3Q9BTN0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LRFN3Q9BTN0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LRFN3Q9BTN0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.29■■□□□ 1
LRFN3Q9BTN0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.28■■□□□ 1
LRFN3Q9BTN0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LRFN3Q9BTN0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRFN3Q9BTN0 KRT18P48-201ENST00000434763 852 ntBASIC21.28■■□□□ 1
LRFN3Q9BTN0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRFN3Q9BTN0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRFN3Q9BTN0 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.28■■□□□ 1
LRFN3Q9BTN0 WWOX-216ENST00000569818 525 ntBASIC21.28■■□□□ 1
LRFN3Q9BTN0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.28■■□□□ 1
LRFN3Q9BTN0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.28■■□□□ 1
LRFN3Q9BTN0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRFN3Q9BTN0 OR7E47P-201ENST00000546390 1422 ntBASIC21.28■■□□□ 1
LRFN3Q9BTN0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRFN3Q9BTN0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRFN3Q9BTN0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRFN3Q9BTN0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRFN3Q9BTN0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRFN3Q9BTN0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRFN3Q9BTN0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LRFN3Q9BTN0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRFN3Q9BTN0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRFN3Q9BTN0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LRFN3Q9BTN0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 AC091076.1-201ENST00000610741 619 ntBASIC21.27■■□□□ 1
LRFN3Q9BTN0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.27■■□□□ 1
LRFN3Q9BTN0 KRT16P2-201ENST00000414673 1423 ntBASIC21.27■■□□□ 1
LRFN3Q9BTN0 KRT8P9-201ENST00000558927 1449 ntBASIC21.27■■□□□ 1
LRFN3Q9BTN0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.27■□□□□ 0.99
LRFN3Q9BTN0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LRFN3Q9BTN0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 LINC01568-207ENST00000641790 1380 ntBASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.26■□□□□ 0.99
LRFN3Q9BTN0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.25■□□□□ 0.99
LRFN3Q9BTN0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms