Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGREF1Q99674 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGREF1Q99674 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGREF1Q99674 GUSBP5-201ENST00000418136 578 ntBASIC19.94■□□□□ 0.78
CGREF1Q99674 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.94■□□□□ 0.78
CGREF1Q99674 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGREF1Q99674 SYT6-210ENST00000641643 1587 ntBASIC19.94■□□□□ 0.78
CGREF1Q99674 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGREF1Q99674 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CGREF1Q99674 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.93■□□□□ 0.78
CGREF1Q99674 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.93■□□□□ 0.78
CGREF1Q99674 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.93■□□□□ 0.78
CGREF1Q99674 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CGREF1Q99674 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CGREF1Q99674 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CGREF1Q99674 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
CGREF1Q99674 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.93■□□□□ 0.78
CGREF1Q99674 SLC47A1P1-202ENST00000449666 945 ntBASIC19.93■□□□□ 0.78
CGREF1Q99674 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CGREF1Q99674 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.93■□□□□ 0.78
CGREF1Q99674 AL035685.1-201ENST00000636663 812 ntBASIC19.93■□□□□ 0.78
CGREF1Q99674 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.93■□□□□ 0.78
CGREF1Q99674 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CGREF1Q99674 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.93■□□□□ 0.78
CGREF1Q99674 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.93■□□□□ 0.78
CGREF1Q99674 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CGREF1Q99674 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGREF1Q99674 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.92■□□□□ 0.78
CGREF1Q99674 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.92■□□□□ 0.78
CGREF1Q99674 GABARAPL3-202ENST00000624044 1851 ntBASIC19.92■□□□□ 0.78
CGREF1Q99674 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.92■□□□□ 0.78
CGREF1Q99674 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
CGREF1Q99674 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.92■□□□□ 0.78
CGREF1Q99674 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.92■□□□□ 0.78
CGREF1Q99674 AC136469.2-201ENST00000623944 1028 ntBASIC19.92■□□□□ 0.78
CGREF1Q99674 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.92■□□□□ 0.78
CGREF1Q99674 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.92■□□□□ 0.78
CGREF1Q99674 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CGREF1Q99674 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.92■□□□□ 0.78
CGREF1Q99674 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CGREF1Q99674 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGREF1Q99674 PLK5-205ENST00000642079 1969 ntBASIC19.92■□□□□ 0.78
CGREF1Q99674 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGREF1Q99674 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGREF1Q99674 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CGREF1Q99674 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGREF1Q99674 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGREF1Q99674 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CGREF1Q99674 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.91■□□□□ 0.78
CGREF1Q99674 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CGREF1Q99674 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.91■□□□□ 0.78
CGREF1Q99674 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CGREF1Q99674 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CGREF1Q99674 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.91■□□□□ 0.78
CGREF1Q99674 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGREF1Q99674 AP005212.1-201ENST00000581547 1997 ntBASIC19.91■□□□□ 0.78
CGREF1Q99674 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGREF1Q99674 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CGREF1Q99674 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CGREF1Q99674 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.9■□□□□ 0.78
CGREF1Q99674 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.9■□□□□ 0.78
CGREF1Q99674 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CGREF1Q99674 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGREF1Q99674 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGREF1Q99674 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CGREF1Q99674 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CGREF1Q99674 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.9■□□□□ 0.78
CGREF1Q99674 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.9■□□□□ 0.78
CGREF1Q99674 DUX4L19-201ENST00000557448 1267 ntBASIC19.9■□□□□ 0.78
CGREF1Q99674 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CGREF1Q99674 AC011298.3-201ENST00000615796 283 ntBASIC19.9■□□□□ 0.78
CGREF1Q99674 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.9■□□□□ 0.78
CGREF1Q99674 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGREF1Q99674 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGREF1Q99674 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGREF1Q99674 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.9■□□□□ 0.78
CGREF1Q99674 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.9■□□□□ 0.78
CGREF1Q99674 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CGREF1Q99674 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGREF1Q99674 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CGREF1Q99674 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms