Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CFAP54Q96N23 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.81■□□□□ 0.92
CFAP54Q96N23 PNMA6B-201ENST00000538162 1200 ntBASIC20.81■□□□□ 0.92
CFAP54Q96N23 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.81■□□□□ 0.92
CFAP54Q96N23 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP54Q96N23 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP54Q96N23 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CFAP54Q96N23 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP54Q96N23 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.81■□□□□ 0.92
CFAP54Q96N23 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.81■□□□□ 0.92
CFAP54Q96N23 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP54Q96N23 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.81■□□□□ 0.92
CFAP54Q96N23 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.81■□□□□ 0.92
CFAP54Q96N23 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CFAP54Q96N23 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP54Q96N23 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.8■□□□□ 0.92
CFAP54Q96N23 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP54Q96N23 SOX15-203ENST00000570788 1093 ntBASIC20.8■□□□□ 0.92
CFAP54Q96N23 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP54Q96N23 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP54Q96N23 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.8■□□□□ 0.92
CFAP54Q96N23 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP54Q96N23 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP54Q96N23 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP54Q96N23 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP54Q96N23 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP54Q96N23 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CFAP54Q96N23 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CFAP54Q96N23 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP54Q96N23 AL135905.2-201ENST00000584934 1404 ntBASIC20.79■□□□□ 0.92
CFAP54Q96N23 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP54Q96N23 MIR6786-201ENST00000616843 113 ntBASIC20.79■□□□□ 0.92
CFAP54Q96N23 AC068587.7-201ENST00000641602 218 ntBASIC20.79■□□□□ 0.92
CFAP54Q96N23 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CFAP54Q96N23 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP54Q96N23 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP54Q96N23 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP54Q96N23 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP54Q96N23 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP54Q96N23 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.79■□□□□ 0.92
CFAP54Q96N23 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.79■□□□□ 0.92
CFAP54Q96N23 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP54Q96N23 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP54Q96N23 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP54Q96N23 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP54Q96N23 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP54Q96N23 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP54Q96N23 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CFAP54Q96N23 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP54Q96N23 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CFAP54Q96N23 AC113347.1-201ENST00000413321 391 ntBASIC20.78■□□□□ 0.92
CFAP54Q96N23 KRT18P57-201ENST00000443599 1254 ntBASIC20.78■□□□□ 0.92
CFAP54Q96N23 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.78■□□□□ 0.92
CFAP54Q96N23 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP54Q96N23 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP54Q96N23 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.78■□□□□ 0.92
CFAP54Q96N23 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP54Q96N23 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.77■□□□□ 0.92
CFAP54Q96N23 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.77■□□□□ 0.92
CFAP54Q96N23 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP54Q96N23 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP54Q96N23 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.77■□□□□ 0.92
CFAP54Q96N23 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP54Q96N23 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP54Q96N23 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.77■□□□□ 0.92
CFAP54Q96N23 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP54Q96N23 LINC01124-201ENST00000409786 2117 ntBASIC20.77■□□□□ 0.92
CFAP54Q96N23 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.91
CFAP54Q96N23 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 AP003071.4-201ENST00000562276 1284 ntBASIC20.76■□□□□ 0.91
CFAP54Q96N23 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP54Q96N23 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.76■□□□□ 0.91
CFAP54Q96N23 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP54Q96N23 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP54Q96N23 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP54Q96N23 POM121L13P-201ENST00000422362 380 ntBASIC20.75■□□□□ 0.91
CFAP54Q96N23 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP54Q96N23 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms